FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 1.685e-61 Identity = 120/150 (80.00%), Postives = 132/150 (88.00%), Query Frame = 1 Query: 91 MRSSVLRSVKTLAKPAGAR------GYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 MR+S+LR +++ + A R Y SESVP+RKVAVLGAAGGIGQPLALLMKLNPLVS+LALYDIA TPGVAADVGHINTRSEVAGY+G +QLGQALE SDVVIIPAGVPRKPGMTRDDLFNINAGIVK LC+AIAKYCPNA+VNMI Sbjct: 1 MRASMLRLIRSRSSSAAPRPHLLRRAYGSESVPERKVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNAVVNMI 150
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_CITLA (Malate dehydrogenase, mitochondrial OS=Citrullus lanatus GN=MMDH PE=1 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 4.149e-60 Identity = 114/150 (76.00%), Postives = 133/150 (88.67%), Query Frame = 1 Query: 91 MRSSVLRSVKTLAKPAGA------RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 M++S+LRSV++ + + R +++ESVP+RKVAVLGAAGGIGQPLALLMKLNPLVS+LALYDIA TPGVAADVGH+NTRSEV GY+G +QLG+ALE SDVVIIPAGVPRKPGMTRDDLFNINAGIVK LC+AIAKYCPNA++NMI Sbjct: 1 MKASILRSVRSAVSRSSSSNRLLSRSFATESVPERKVAVLGAAGGIGQPLALLMKLNPLVSKLALYDIAGTPGVAADVGHVNTRSEVTGYVGEEQLGKALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNALINMI 150
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM2_ARATH (Malate dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=At3g15020 PE=1 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 6.624e-58 Identity = 110/143 (76.92%), Postives = 127/143 (88.81%), Query Frame = 1 Query: 94 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 RS ++RS + + RG++SESVPDRKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIANTPGVAADVGHINTRS+V+GYMG+D LG+ALE +D+VIIPAGVPRKPGMTRDDLFNINAGIVK+L AIAKYCP A+VNMI Sbjct: 3 RSMIVRSASPVKQGLLRRGFASESVPDRKVVILGAAGGIGQPLSLLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVSGYMGDDDLGKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLSIAIAKYCPQALVNMI 145
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 8.652e-58 Identity = 110/143 (76.92%), Postives = 127/143 (88.81%), Query Frame = 1 Query: 94 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 RS ++RS + + R +SS SVP+RKVA+LGAAGGIGQPLALLMKLNPLVS L+LYDIANTPGVAADVGHINTRSEV GYMG+D L +ALE +D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC+AIAKYCP+A++NMI Sbjct: 3 RSMLVRSSASAKQAVIRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHALINMI 145
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_FRAAN (Malate dehydrogenase, mitochondrial OS=Fragaria ananassa GN=MMDHI PE=1 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 2.517e-57 Identity = 113/141 (80.14%), Postives = 125/141 (88.65%), Query Frame = 1 Query: 100 SVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 S++RSV +A+ RGYSSESVP RKVAVLGAAGGIGQPLALLMKLNPLVS+L+LYDIA TPGVAADV HINTRSEV GY G +QLG+ALE DVVIIPAGVPRKPGMTRDDLFNINAGIV+ L +AIAKYCP+AI+NMI Sbjct: 6 SLIRSVSRVAR----RGYSSESVPQRKVAVLGAAGGIGQPLALLMKLNPLVSQLSLYDIAGTPGVAADVSHINTRSEVKGYAGEEQLGEALEGCDVVIIPAGVPRKPGMTRDDLFNINAGIVRSLTAAIAKYCPHAIINMI 142
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_BRANA (Malate dehydrogenase, mitochondrial OS=Brassica napus GN=MDH PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 9.565e-57 Identity = 110/143 (76.92%), Postives = 127/143 (88.81%), Query Frame = 1 Query: 94 RSSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 RS+++RS + + R +SS SVP+RKVA+LGAAGGIGQPLALLMKLNPLVS L+LYDIANTPGVAADVGHINTRS+V GYMG+D L +ALE +D+VIIPAGVPRKPGMTRDDLFNINAGIVK+L SAIAKYCP+A+VNMI Sbjct: 3 RSALVRSSASAKQSLLRRSFSSGSVPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSQVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLWSAIAKYCPHALVNMI 145
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3) HSP 1 Score: 176.792 bits (447), Expect = 5.444e-44 Identity = 96/155 (61.94%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 61 ASLKSKPATKMRSS-VLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 AS PA++M S +LR AK A P KVA+LGA+GGIGQPLALLMK+NPLVS L LYD+ NTPGV AD+ H+NT + V G++G QL AL D+VIIPAGVPRKPGMTRDDLFNINAGIV+ LC IAK CPNAIVN+I Sbjct: 15 ASHLRPPASQMEESPLLRGSNCRAKGAA---------PGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNAIVNVI 160
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.287e-42 Identity = 90/142 (63.38%), Postives = 105/142 (73.94%), Query Frame = 1 Query: 97 SSVLRSVKTLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 SSVLR AK GA G+ KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ N PGV AD+ H++T + V G++G QL +AL D+V+IPAGVPRKPGMTRDDLF INAGIVK LC IAK CP AIVN+I Sbjct: 28 SSVLRRANCRAK-GGAPGF--------KVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTAIVNLI 160
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 3.902e-42 Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV +D+ H++T + V G++G QL AL D+VIIPAGVPRKPGMTRDDLFNINAGIVK LC AIAK CP AIVN+I Sbjct: 43 KVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKAIVNVI 157
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_MOUSE (Malate dehydrogenase, mitochondrial OS=Mus musculus GN=Mdh2 PE=1 SV=3) HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42 Identity = 87/139 (62.59%), Postives = 109/139 (78.42%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PAGA R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI TR+ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++CP A+V +I Sbjct: 2 LSALARPAGAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRANVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEAMVCII 140 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231 ZOOMx 1POSITION0
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Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |