FC930915
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 1.255e-40 Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 169 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 P KVA+LGAAGGIGQ L+LLMK+NPLVS L LYD+ N PGV ADV H++T + V G++G QL AL D+VIIPAG+PRKPGMTRDDLF INAGIVK LC +AK CPNAIVN+I Sbjct: 41 PGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNAIVNLI 158
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 2.141e-40 Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 169 PDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 P KVA+LGAAGGIGQ L+LLMK+NPLVS L LYD+ N PGV ADV H++T + V G++G QL AL D+VIIPAGVPRKPGMTRDDLF INAGIV+ LC +AK CPNAIVN+I Sbjct: 45 PGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNAIVNLI 162
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_MACFA (Malate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=MDH2 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 3.091e-39 Identity = 83/139 (59.71%), Postives = 107/139 (76.98%), Query Frame = 1 Query: 115 VKTLAKPAGA---RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 + LA+PA A R +S+ + + KVAVLGA+GGIGQPL+LL+K +PLVSRL LYDIA+TPGVAAD+ HI T++ V GY+G +QL L+ DVV+IPAGVPRKPGMTRDDLFN NA IV L +A A++ P A++ +I Sbjct: 2 LSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETKAVVKGYLGPEQLPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLAAACAQHRPEAMICII 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_CAEEL (Probable malate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=mdh-1 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 5.830e-38 Identity = 80/139 (57.55%), Postives = 104/139 (74.82%), Query Frame = 1 Query: 118 KTLAKPAGARGYSSESVPDR----KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KTL + A G + SV KVA+LGAAGGIGQPL LL+K +PLV+ LALYD+ NTPGVAAD+ HI++ ++V + G +L A+E++DV++IPAGVPRKPGMTRDDLFN NAGIV+DL + IAK P A++ +I Sbjct: 6 KTLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAII 144
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_SCHPO (Malate dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=MDH1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 9.308e-36 Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 1 Query: 121 TLAKPAGARGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQ-LGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNA 507 T K R +S+ S KVAVLGA GGIGQPL++L+KLN VS LAL+DI PGVAAD+GHINT S V GY +D+ L +AL +DVVIIPAGVPRKPGMTRDDLF NA IV+DL A + CP A Sbjct: 11 TPLKSIAPRSFSTTSSRAFKVAVLGAGGGIGQPLSMLLKLNDKVSELALFDIRGAPGVAADIGHINTTSNVVGYAPDDKGLEKALNGADVVIIPAGVPRKPGMTRDDLFATNASIVRDLAFAAGETCPEA 140
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHP_YEAST (Malate dehydrogenase, peroxisomal OS=Saccharomyces cerevisiae GN=MDH3 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 1.643e-32 Identity = 67/115 (58.26%), Postives = 86/115 (74.78%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 KVA+LGA+GG+GQPL+LL+KL+P VS LALYDI G+ D+ HINT S GY D + L ++ VV+IPAGVPRKPG+TRDDLF +NAGIVK L +A+ K+ PNA + +I Sbjct: 3 KVAILGASGGVGQPLSLLLKLSPYVSELALYDIRAAEGIGKDLSHINTNSSCVGY-DKDSIENTLSNAQVVLIPAGVPRKPGLTRDDLFKMNAGIVKSLVTAVGKFAPNARILVI 116
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_YEAST (Malate dehydrogenase, mitochondrial OS=Saccharomyces cerevisiae GN=MDH1 PE=1 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.065e-31 Identity = 73/128 (57.03%), Postives = 89/128 (69.53%), Query Frame = 1 Query: 145 RGYSSESVPDRKVAVLGAAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGN--DQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 R +SS KV VLGA GGIGQPL+LL+KLN V+ L LYD+ GVA D+ HI T S V G+ D L AL+D+D+V+IPAGVPRKPGMTRDDLF INA IV+DL +A A+ PNA + +I Sbjct: 8 RAFSSTVANPYKVTVLGAGGGIGQPLSLLLKLNHKVTDLRLYDLKGAKGVATDLSHIPTNSVVKGFTPEEPDGLNNALKDTDMVLIPAGVPRKPGMTRDDLFAINASIVRDLAAATAESAPNAAILVI 135
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_HAES2 (Malate dehydrogenase OS=Haemophilus somnus (strain 2336) GN=mdh PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.047e-31 Identity = 75/117 (64.10%), Postives = 88/117 (75.21%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D + ALE++DVV+I AGV RKPGM R DLFNINAGIVK+L +AK CP A V +I Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPI-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGII 117
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDHM_SCHMA (Malate dehydrogenase, mitochondrial (Fragment) OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 5.285e-31 Identity = 63/109 (57.80%), Postives = 86/109 (78.90%), Query Frame = 1 Query: 196 AAGGIGQPLALLMKLNPLVSRLALYDIANTPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 A+GGIG+PL+LL+K +PL+S+LALYDIA+ GVAAD+ HI T++ V ++G +L + L ++VVIIPAG+PRKPGMTRDDLFN NA IV +L + AK CP A++ +I Sbjct: 1 ASGGIGEPLSLLLKQSPLISQLALYDIAHVKGVAADLSHIETQAHVTAHLGPGELAECLTGANVVIIPAGLPRKPGMTRDDLFNTNASIVAELIDSCAKNCPKAMICII 109
BLAST of FC930915 vs. ExPASy Swiss-Prot
Match: MDH_HAES1 (Malate dehydrogenase OS=Haemophilus somnus (strain 129Pt) GN=mdh PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 9.015e-31 Identity = 75/117 (64.10%), Postives = 87/117 (74.36%), Query Frame = 1 Query: 178 KVAVLGAAGGIGQPLALLMKLN-PLVSRLALYDIAN-TPGVAADVGHINTRSEVAGYMGNDQLGQALEDSDVVIIPAGVPRKPGMTRDDLFNINAGIVKDLCSAIAKYCPNAIVNMI 522 K+AVLGAAGGIGQ LALL+KL P S L+LYDIA TPGVAADV HI T ++ G+ G D ALE++DVV+I AGV RKPGM R DLFNINAGIVK+L +AK CP A V +I Sbjct: 2 KIAVLGAAGGIGQALALLLKLQLPAGSELSLYDIAPVTPGVAADVSHIPTAVKIQGFAGEDPT-PALENADVVLISAGVARKPGMDRSDLFNINAGIVKNLIEKVAKTCPKACVGII 117 The following BLAST results are available for this feature:
BLAST of FC930915 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 231
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC930915 ID=FC930915; Name=FC930915; organism=Citrus clementina; type=EST; length=524bpback to top |