FC931133
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP15_ARATH (Transcription factor TCP15 OS=Arabidopsis thaliana GN=TCP15 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.422e-35 Identity = 64/175 (36.57%), Postives = 81/175 (46.29%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTXXXXXXXXXXXXXXATHLRNTYFNPNFGSQQLMRNMRSEWERTLIDNNCNSLSFPLTGGNVNAMLQSNKQELRDNNTIATTTTSLDVSEADTGMGRKRRPDQELSQNNQMGSYLVQSSTGSIPASHSTIPATFW 683 F + HKSDGETIEWLLQQAEPAVIAATGTGTIPANFT A HLR T + F S S++ L ++ ++R N ++++S +L +NQMG+YLVQS+ GS+P S S A FW Sbjct: 77 FQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSRSSLSAAHLRTTPSSYYFHSPH------------------QSMTHHL----------QHQHQVRPKNESHSSSSS----------------SSQLLDHNQMGNYLVQSTAGSLPTSQSPATAPFW 207 HSP 2 Score: 76.2554 bits (186), Expect = 4.422e-35 Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 1 Query: 64 PVPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 P PKRTSTKDRHTKVEGRGRRIRMPA CAARVFQLT+EL Sbjct: 45 PPPKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTREL 83
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP14_ARATH (Transcription factor TCP14 OS=Arabidopsis thaliana GN=TCP14 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.373e-28 Identity = 65/203 (32.02%), Postives = 86/203 (42.36%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT-XXXXXXXXXXXXXXATHLRN--TYFNPNFGSQQLMRNMRSEWER---------------------TLIDNNCNSLSFPLTGGNVNAMLQSNKQELRDNNTIATTTTSLDVSEADTGMGRKRRPDQELSQNNQMGSYLVQSSTG---SIPASHSTIPATFWM 686 F + HKSDGETIEWLLQQAEP+VIAATGTGTIPANFT +H R+ + F+PN M + + +R IDN + SF + +EL TTS D+ + Q+ Q++Q+G Y +QSS + A+ IP FWM Sbjct: 142 FQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSSMSLPSHFRSAASTFSPNNIFSPAMLQQQQQQQRGGGVGFHHPHLQGRAPTSSLFPGIDNFTPTTSFLNFHNPTKQEGDQDSEELNSEKKRRIQTTS-DLHQ-----------QQQQHQHDQIGGYTLQSSNSGSTATAAAAQQIPGNFWM 332 HSP 2 Score: 69.3218 bits (168), Expect = 7.373e-28 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 64 PVPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 P KR STKDRHTKV+GRGRRIRMPA CAARVFQLT+EL Sbjct: 110 PPLKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTREL 148
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP8_ARATH (Transcription factor TCP8 OS=Arabidopsis thaliana GN=TCP8 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.188e-24 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 281 F + HKSDGETIEWLLQQAEPA++AATGTGTIPANF+ Sbjct: 85 FQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFS 125 HSP 2 Score: 65.0846 bits (157), Expect = 1.188e-24 Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 Query: 76 RTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 + STKDRHTKV+GRGRRIRMPA CAARVFQLT+EL Sbjct: 57 KRSTKDRHTKVDGRGRRIRMPALCAARVFQLTREL 91
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: PCF3_ORYSJ (Transcription factor PCF3 OS=Oryza sativa subsp. japonica GN=PCF3 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.424e-24 Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 281 F + HK+DGETIEWLLQQAEPA++AATGTGTIPANF+ Sbjct: 177 FQLTRELGHKTDGETIEWLLQQAEPAIVAATGTGTIPANFS 217 HSP 2 Score: 64.3142 bits (155), Expect = 4.424e-24 Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 1 Query: 85 TKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 TKDRHTKVEGRGRRIRMPA CAARVFQLT+EL Sbjct: 152 TKDRHTKVEGRGRRIRMPALCAARVFQLTREL 183
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP22_ARATH (Transcription factor TCP22 OS=Arabidopsis thaliana GN=TCP22 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 7.516e-24 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 281 F + HKSDGETIEWLLQQAEPA+IA+TGTGTIPANF+ Sbjct: 88 FQLTRELGHKSDGETIEWLLQQAEPAIIASTGTGTIPANFS 128 HSP 2 Score: 63.1586 bits (152), Expect = 7.516e-24 Identity = 29/32 (90.62%), Postives = 31/32 (96.88%), Query Frame = 1 Query: 85 TKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 TKDRHTKV+GRGRRIRMPA CAARVFQLT+EL Sbjct: 63 TKDRHTKVDGRGRRIRMPAMCAARVFQLTREL 94
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP23_ARATH (Transcription factor TCP23 OS=Arabidopsis thaliana GN=TCP23 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.159e-23 Identity = 31/41 (75.61%), Postives = 35/41 (85.37%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPANFT 281 F + +HKSDGETIEWLLQQAEPA+IAATGTGTIPAN + Sbjct: 80 FQLTRELQHKSDGETIEWLLQQAEPAIIAATGTGTIPANIS 120 HSP 2 Score: 61.6178 bits (148), Expect = 2.159e-23 Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 1 Query: 70 PKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 P + +KDRH KV+GRGRRIRMPA CAARVFQLT+EL Sbjct: 50 PAKRPSKDRHIKVDGRGRRIRMPAICAARVFQLTREL 86
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP19_ARATH (Transcription factor TCP19 OS=Arabidopsis thaliana GN=TCP19 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.167e-23 Identity = 33/39 (84.62%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 64 PVPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 P PKR ++KDRHTKVEGRGRRIRMPA CAARVFQLT+EL Sbjct: 50 PAPKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTREL 88 HSP 2 Score: 57.7658 bits (138), Expect = 2.167e-23 Identity = 25/38 (65.79%), Postives = 30/38 (78.95%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPA 272 F + HKSDGETI WLL++AEPA+I ATGTGT+PA Sbjct: 82 FQLTRELGHKSDGETIRWLLERAEPAIIEATGTGTVPA 119
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: TCP9_ARATH (Transcription factor TCP9 OS=Arabidopsis thaliana GN=TCP9 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.807e-23 Identity = 33/39 (84.62%), Postives = 35/39 (89.74%), Query Frame = 1 Query: 64 PVPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 P KR STKDRHTKVEGRGRRIRMPA CAAR+FQLT+EL Sbjct: 68 PPLKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTREL 106 HSP 2 Score: 59.3066 bits (142), Expect = 2.807e-23 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPA 272 F + HKSDGETI WLL+ AEPA+IAATGTGT+PA Sbjct: 100 FQLTRELGHKSDGETIRWLLENAEPAIIAATGTGTVPA 137
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSJ (Transcription factor PCF2 OS=Oryza sativa subsp. japonica GN=PCF2 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.453e-21 Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 88 KDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 +DRHTKVEGRGRRIRMPAACAAR+FQLT+EL Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTREL 106 HSP 2 Score: 61.2326 bits (147), Expect = 1.453e-21 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPA 272 F + HKSDGETI WLLQQ+EPA+IAATGTGT+PA Sbjct: 100 FQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPA 137
BLAST of FC931133 vs. ExPASy Swiss-Prot
Match: PCF2_ORYSI (Transcription factor PCF2 OS=Oryza sativa subsp. indica GN=PCF2 PE=4 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 1.453e-21 Identity = 28/31 (90.32%), Postives = 31/31 (100.00%), Query Frame = 1 Query: 88 KDRHTKVEGRGRRIRMPAACAARVFQLTQEL 180 +DRHTKVEGRGRRIRMPAACAAR+FQLT+EL Sbjct: 76 RDRHTKVEGRGRRIRMPAACAARIFQLTREL 106 HSP 2 Score: 61.2326 bits (147), Expect = 1.453e-21 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 3 Query: 159 FSVDSRTRHKSDGETIEWLLQQAEPAVIAATGTGTIPA 272 F + HKSDGETI WLLQQ+EPA+IAATGTGT+PA Sbjct: 100 FQLTRELGHKSDGETIRWLLQQSEPAIIAATGTGTVPA 137 The following BLAST results are available for this feature:
BLAST of FC931133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931133 ID=FC931133; Name=FC931133; organism=Citrus clementina; type=EST; length=687bpback to top |