FC931225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.040e-60 Identity = 116/137 (84.67%), Postives = 127/137 (92.70%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 412 LQCVLTPGDPYMPLPN+EIIRRV+KQVLALFPSSQGLEV WSSVVKIGQSLYREGPGKDPFRPDQKTPV+NFFLAGSYTKQDYIDSMEGATLSGRQASAYIC+AGE+L+ALRK++AA E E + + +DELSLV Sbjct: 453 LQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNE-ISKGVSLSDELSLV 588
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1) HSP 1 Score: 230.335 bits (586), Expect = 7.752e-60 Identity = 116/137 (84.67%), Postives = 124/137 (90.51%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 412 LQCVLTPGDPYMPLPN+EII RV+KQVLALFPSSQGLEV WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASA+IC+AGEEL ALRKQLAA +S + + DE+SLV Sbjct: 456 LQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQSIDSIGV-----DEMSLV 587
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58 Identity = 112/137 (81.75%), Postives = 123/137 (89.78%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 412 LQCVLTPGDPYMPL NDEII+RV KQVLALFPSSQGLEV WSSV+KIGQSLYREGPGKDPFRPDQKTPV+NFFLAGSYTKQDYIDSMEGATLSGRQASAYICN GE+L+ALRK++ A E + + + +DELSLV Sbjct: 453 LQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELND-ISKGVSLSDELSLV 588
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58 Identity = 110/137 (80.29%), Postives = 122/137 (89.05%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 412 +Q VLTPGDPYMPLPND II RV KQVL LFPSSQGLEV+WSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQA+AYIC+AGE+L ALRK++AA ++ + + +DELSLV Sbjct: 438 IQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVSDELSLV 574
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3) HSP 1 Score: 205.682 bits (522), Expect = 2.045e-52 Identity = 103/137 (75.18%), Postives = 114/137 (83.21%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 412 LQCVLTPGDPYM +PND+II +VA QV LFPSS+GLEV WSSVVKI QSLYRE PGKDPFRPDQKTP+KNFFLAGSYTKQDYIDSMEGATLSGRQAS+YIC+AGEEL L K+L++ + T DELSLV Sbjct: 430 LQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS--------SATAVPDELSLV 558
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 1.015e-51 Identity = 97/124 (78.23%), Postives = 110/124 (88.71%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELVALRKQLAAFESQEQM 373 +Q VLTPGDPYMPLPN+EII +V KQV+ LFPSS+GLEV WSSVVKIGQSLYRE PG DPFRPDQKTPVKNFFL+GSYTKQDYIDSMEGATLSGR+ SAYIC AGEEL+ALRK+L + ++ + Sbjct: 438 IQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKLLIDDGEKAL 561
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.800e-32 Identity = 69/101 (68.32%), Postives = 78/101 (77.23%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYI 304 LQ VLTPGDP+M N+ I RV KQV ALFPS+ L + W SV+K+ QSLYRE PG D FRP Q TP+ NFFLAGSYT+QDYIDSMEGATLSGRQA+ I Sbjct: 374 LQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAI 474
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 8.932e-32 Identity = 66/101 (65.35%), Postives = 80/101 (79.21%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYI 304 LQ VLTPGDP++ N+ I + V KQV LFPSS+ L + W SVVK+ QSLYRE PG D +RP+QKTP+ NFFLAGSYT+QDYIDSMEGAT+SGR+A+ I Sbjct: 373 LQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVI 473
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPS----SQGLEVIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYI 304 L+ VL P ++ ++EI+ ++ LFP ++ S VVK +S+Y+ PG+ RPDQ+T V NF+LAG +T Q Y+ SMEGA LSG+Q + I Sbjct: 349 LELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAI 453
BLAST of FC931225 vs. ExPASy Swiss-Prot
Match: CRTI_SOLLC (Phytoene dehydrogenase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=PDS PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 43/114 (37.72%), Postives = 65/114 (57.02%), Query Frame = 2 Query: 2 LQCVLTPGDPYMPLPNDEIIRRVAKQVLALFPSSQGLE-----VIWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICNAGEELV 328 L+ V P + ++ + EII K++ LFP + ++ VVK +S+Y+ PG +P RP Q++P++ F+LAG YTKQ Y+ SMEGA LSG+ + I E LV Sbjct: 457 LELVFAPAEEWISRSDSEIIDATMKELATLFPDEISADQSKAKILKYHVVKTPRSVYKTVPGCEPCRPLQRSPIEGFYLAGDYTKQKYLASMEGAVLSGKLCAQAIVQDYELLV 570 The following BLAST results are available for this feature:
BLAST of FC931225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931225 ID=FC931225; Name=FC931225; organism=Citrus clementina; type=EST; length=715bpback to top |