FC931309
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDH_SPHYA (Isocitrate dehydrogenase [NADP] OS=Sphingomonas yanoikuyae GN=icd PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.773e-56 Identity = 93/141 (65.96%), Postives = 121/141 (85.82%), Query Frame = 3 Query: 279 RVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATD 701 ++KV+NP+VE+DGDEMTRIIW+ I+++LI PYLD+D+KYYDL + RD T D++T+++A A +Y V +KCATITPDE R++EFGLK MW+SPNGTIRNIL G VFREPI+ +N+PR+VPGW PI +GRHAFGDQY+ATD Sbjct: 3 KIKVKNPVVEIDGDEMTRIIWEWIRERLILPYLDVDLKYYDLSVEKRDETSDQITIDAANAIKEYGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVVFREPIVIKNVPRLVPGWTDPIVVGRHAFGDQYKATD 143
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_PONAB (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 2.315e-56 Identity = 100/137 (72.99%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLIFPY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.315e-56 Identity = 100/137 (72.99%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLIFPY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.949e-56 Identity = 100/137 (72.99%), Postives = 119/137 (86.86%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLIFPY+DLD+ YDL I NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVDLDLHSYDLSIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 8.798e-56 Identity = 99/137 (72.26%), Postives = 120/137 (87.59%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLIFPY++LD+ YDLGI NRDAT+D+VT ++AEA K+NV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLIFPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKHNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVSGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55 Identity = 99/137 (72.26%), Postives = 119/137 (86.86%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLI PY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55 Identity = 99/137 (72.26%), Postives = 119/137 (86.86%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLI PY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55 Identity = 99/137 (72.26%), Postives = 119/137 (86.86%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLI PY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.149e-55 Identity = 99/137 (72.26%), Postives = 119/137 (86.86%), Query Frame = 3 Query: 300 IVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVI 710 +VEM GDEMTRIIW++IK+KLI PY++LD+ YDLGI NRDAT+D+VT ++AEA KYNV +KCATITPDE R++EF LK MW+SPNGTIRNIL GTVFRE I+C+NIPR+V GW KPI IGRHA+GDQYRATD V+ Sbjct: 10 VVEMQGDEMTRIIWELIKEKLILPYVELDLHSYDLGIENRDATNDQVTKDAAEAIKKYNVGVKCATITPDEKRVEEFKLKQMWKSPNGTIRNILGGTVFREAIICKNIPRLVTGWVKPIIIGRHAYGDQYRATDFVV 146
BLAST of FC931309 vs. ExPASy Swiss-Prot
Match: IDHC_DICDI (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Dictyostelium discoideum GN=idhC PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 7.708e-52 Identity = 91/147 (61.90%), Postives = 117/147 (79.59%), Query Frame = 3 Query: 273 IDRVKVQNPIVEMDGDEMTRIIWQMIKDKLIFPYLDLDIKYYDLGILNRDATDDKVTVESAEATLKYNVAIKCATITPDETRMKEFGLKSMWRSPNGTIRNILNGTVFREPILCQNIPRIVPGWKKPICIGRHAFGDQYRATDTVIK 713 ++++ V NP+ + GDE TR+IW +I+ KLIFP+LDL ++ YDLGI RD T+D+VT+++A A + V IKCATITPDE R+ EFGLK MW+SPNGTIRN L GT+FREPI+C+N+PR+V W K I IGRHAFGDQYRATD V+K Sbjct: 2 VEKIIVSNPVANLLGDEQTRVIWDLIEKKLIFPFLDLKVETYDLGIEYRDKTNDQVTIDAANAIKRLKVGIKCATITPDEARVTEFGLKEMWKSPNGTIRNTLGGTLFREPIVCKNVPRLVTCWNKSIVIGRHAFGDQYRATDFVVK 148 The following BLAST results are available for this feature:
BLAST of FC931309 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931309 ID=FC931309; Name=FC931309; organism=Citrus clementina; type=EST; length=715bpback to top |