FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_CHICK (Ras-related protein Rab-6A OS=Gallus gallus GN=RAB6A PE=2 SV=3) HSP 1 Score: 110.538 bits (275), Expect = 1.211e-47 Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 73 HSP 2 Score: 100.908 bits (250), Expect = 1.211e-47 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+ AV+VYD+ + SF TTKW+++VRTERGSDVII+LVGNK L K IEEGE K ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_CAEEL (Ras-related protein Rab-6.1 OS=Caenorhabditis elegans GN=rab-6.1 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.212e-47 Identity = 55/65 (84.62%), Postives = 59/65 (90.77%), Query Frame = 1 Query: 304 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +AL K+KLVFLG+QSVGKTSIITRFMYD FDNTYQATIGIDFLSKTMYLEDRT+RLQLW QE Sbjct: 7 NALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQE 71 HSP 2 Score: 98.2117 bits (243), Expect = 1.212e-47 Identity = 55/90 (61.11%), Postives = 66/90 (73.33%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDSSVAV+VYD+ + SF TTKWV++VR ERG DVIIVLVGNK L K E+GE K ++ ETSA+ Sbjct: 67 TAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNERGCDVIIVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAK 156
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6B_CAEEL (Ras-related protein Rab-6.2 OS=Caenorhabditis elegans GN=rab-6.2 PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 5.939e-47 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 8 LKKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70 HSP 2 Score: 98.2117 bits (243), Expect = 5.939e-47 Identity = 53/90 (58.89%), Postives = 68/90 (75.56%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF T+KW+++VRTERGSDVII+LVGNK L K +EGE K ++ ETSA+ Sbjct: 66 TAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTERGSDVIIMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAK 155
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPT6_YEAST (GTP-binding protein YPT6 OS=Saccharomyces cerevisiae GN=YPT6 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 7.384e-41 Identity = 48/64 (75.00%), Postives = 56/64 (87.50%), Query Frame = 1 Query: 307 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +L KYK+VFLG+Q VGKTS+ITRFMYD FD+ YQATIGIDFLSKTMYL+D+T+RLQLW QE Sbjct: 7 SLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQE 70 HSP 2 Score: 85.5001 bits (210), Expect = 7.384e-41 Identity = 49/92 (53.26%), Postives = 64/92 (69.57%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSD-VIIVLVGNKLILWTKGSF-IEEGE--AKLVSSCYVYETSAR 736 ++GQERFRSLIPSYIRDS VA+IVYD+ R+SF KW+E+V+ ERG + VI+ +VGNK L + EEGE AKL+ + ETS + Sbjct: 66 TAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTK 157
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB41_HUMAN (Ras-related protein Rab-41 OS=Homo sapiens GN=RAB41 PE=2 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 3.243e-38 Identity = 49/90 (54.44%), Postives = 65/90 (72.22%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERF SLIPSYIRDS++AV+VYD+ + SF T KWVE VR ERG DV+I+L+GNK+ L K E+GE K + ++ ETSA+ Sbjct: 87 TAGQERFHSLIPSYIRDSTIAVVVYDITNINSFKETDKWVEHVRAERGDDVVIMLLGNKIDLDNKRQVTAEQGEEKSRNLNVMFIETSAK 176 HSP 2 Score: 88.5817 bits (218), Expect = 3.243e-38 Identity = 44/64 (68.75%), Postives = 52/64 (81.25%), Query Frame = 1 Query: 307 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +L K KL+FLG+QSVGKTSII+RFMY+ F QAT+GIDFLSKTMYLED+ V+LQLW QE Sbjct: 28 SLCKSKLLFLGEQSVGKTSIISRFMYNSFGCACQATVGIDFLSKTMYLEDQIVQLQLWDTAGQE 91
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_RAT (Ras-related protein Rab-6A (Fragment) OS=Rattus norvegicus GN=Rab6a PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.615e-21 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF TTKW+++VRTERGSDVII+LVGNK L K IEEGE K ++ ETSA+ Sbjct: 1 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 90
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 2.984e-21 Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R ++ A++ YD+ R SFL+ W+E+VR GS+++ +L+GNK Sbjct: 74 TAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 132 HSP 2 Score: 57.7658 bits (138), Expect = 2.984e-21 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+W QE Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 78
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: VPS21_YEAST (Vacuolar protein sorting-associated protein 21 OS=Saccharomyces cerevisiae GN=VPS21 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 8.547e-21 Identity = 40/94 (42.55%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGS----FIEEGEAKLV--SSCYVYETSAR 736 ++GQERF SL P Y R++ A++VYDV QSF+ WV+E+ + D+II LVGNK+ + +G EEGE KL +ETSA+ Sbjct: 63 TAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGE-KLAEEKGLLFFETSAK 155 HSP 2 Score: 51.2174 bits (121), Expect = 8.547e-21 Identity = 23/65 (35.38%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 304 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +++ KLV LG+ +VGK+SI+ RF+ + F + TIG FL++ + + + TV+ ++W QE Sbjct: 3 TSVTSIKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQE 67
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB43_RAT (Ras-related protein Rab-43 OS=Rattus norvegicus GN=Rab43 PE=2 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.547e-21 Identity = 25/59 (42.37%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R ++ A++ YD++ R +FL+ W+E+VR GS+++ +L+GNK Sbjct: 72 TAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130 HSP 2 Score: 56.9954 bits (136), Expect = 8.547e-21 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+W QE Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 76
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB43_MOUSE (Ras-related protein Rab-43 OS=Mus musculus GN=Rab43 PE=1 SV=1) HSP 1 Score: 64.3142 bits (155), Expect = 8.547e-21 Identity = 25/59 (42.37%), Postives = 44/59 (74.58%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R ++ A++ YD++ R +FL+ W+E+VR GS+++ +L+GNK Sbjct: 72 TAGQERFRTITQSYYRSANGAILAYDISKRSTFLSVPHWIEDVRKYAGSNIVQLLIGNK 130 HSP 2 Score: 56.9954 bits (136), Expect = 8.547e-21 Identity = 26/60 (43.33%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KLV +GD SVGKT ++ RF F +TIG+DF KT+ ++ + V+LQ+W QE Sbjct: 17 FKLVLVGDASVGKTCVVQRFKTGAFSARQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 76 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |