FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RBH1B_ARATH (Ras-related protein RABH1B OS=Arabidopsis thaliana GN=RABH1B PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.373e-58 Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 1 Query: 292 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69 HSP 2 Score: 117.857 bits (294), Expect = 2.373e-58 Identity = 66/90 (73.33%), Postives = 74/90 (82.22%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKW++EVRTERGSDVI+VLVGNK L K IEE EAK ++ ETSA+ Sbjct: 65 TAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWIDEVRTERGSDVIVVLVGNKTDLVDKRQVSIEEAEAKARELNVMFIETSAK 154
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RBH1C_ARATH (Ras-related protein RABH1C OS=Arabidopsis thaliana GN=RABH1C PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.745e-49 Identity = 60/69 (86.96%), Postives = 61/69 (88.41%), Query Frame = 1 Query: 292 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 MA VS LAK+KLVFLGDQSVGKTSIITRFMYDKFD TYQ TIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 1 MASVSPLAKFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69 HSP 2 Score: 98.9821 bits (245), Expect = 1.745e-49 Identity = 53/77 (68.83%), Postives = 64/77 (83.12%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERG-SDVIIVLVGNKLILWTKGSF-IEEGEAK 697 ++GQERFRSLIPSYIRDSSVA++VYDV++RQ+FLNT+KW+E+V ERG S+VIIVLVGNK L K I EGE K Sbjct: 65 TAGQERFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEGEDK 141
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6_DICDI (Ras-related protein Rab-6 OS=Dictyostelium discoideum GN=rab6 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.116e-48 Identity = 56/66 (84.85%), Postives = 59/66 (89.39%), Query Frame = 1 Query: 301 VSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 + +L+KYKLVFLGDQSVGKTSIITRFMYD FD TYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 1 MESLSKYKLVFLGDQSVGKTSIITRFMYDTFDITYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 66 HSP 2 Score: 102.449 bits (254), Expect = 1.116e-48 Identity = 54/90 (60.00%), Postives = 70/90 (77.78%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDSSVA++VYD+ ++ SF NT KW+E+VR ERG++V+I+LVGNK L K IEEGEAK ++ ETSA+ Sbjct: 62 TAGQERFRSLIPSYIRDSSVAIVVYDITNKVSFTNTIKWIEDVRNERGNNVVIMLVGNKTDLADKRQVSIEEGEAKAKEYDIMFTETSAK 151
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RYH1_SCHPO (GTP-binding protein ryh1 OS=Schizosaccharomyces pombe GN=ryh1 PE=1 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.897e-48 Identity = 54/64 (84.38%), Postives = 59/64 (92.19%), Query Frame = 1 Query: 307 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +L K+KLVFLG+QSVGKTS+ITRFMYD+FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 8 SLRKFKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71 HSP 2 Score: 102.449 bits (254), Expect = 1.897e-48 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFI-EEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDSSVA+IVYD+ + SF+NT KW+E+VR ERG DVIIVLVGNK L K EEGE K ++ ETSA+ Sbjct: 67 TAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAK 156
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6B_MOUSE (Ras-related protein Rab-6B OS=Mus musculus GN=Rab6b PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGE--AKLVSSCYVYETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF T+KW+++VRTERGSDVII+LVGNK L K IEEGE AK +S ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI-ETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6B_HUMAN (Ras-related protein Rab-6B OS=Homo sapiens GN=RAB6B PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGE--AKLVSSCYVYETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF T+KW+++VRTERGSDVII+LVGNK L K IEEGE AK +S ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI-ETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6B_BOVIN (Ras-related protein Rab-6B OS=Bos taurus GN=RAB6B PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 57/91 (62.64%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGE--AKLVSSCYVYETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF T+KW+++VRTERGSDVII+LVGNK L K IEEGE AK +S ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERGSDVIIMLVGNKTDLADKRQITIEEGEQRAKELSVMFI-ETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_PONAB (Ras-related protein Rab-6A OS=Pongo abelii GN=RAB6A PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF TTKW+++VRTERGSDVII+LVGNK L K IEEGE K ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_MOUSE (Ras-related protein Rab-6A OS=Mus musculus GN=Rab6a PE=1 SV=4) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF TTKW+++VRTERGSDVII+LVGNK L K IEEGE K ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 158
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6A_HUMAN (Ras-related protein Rab-6A OS=Homo sapiens GN=RAB6A PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 3.221e-48 Identity = 54/63 (85.71%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K+KLVFLG+QSVGKTS+ITRFMYD FDNTYQATIGIDFLSKTMYLEDRTVRLQLW QE Sbjct: 11 LRKFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 73 HSP 2 Score: 102.449 bits (254), Expect = 3.221e-48 Identity = 56/90 (62.22%), Postives = 69/90 (76.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVSSCYVY-ETSAR 736 ++GQERFRSLIPSYIRDS+VAV+VYD+ + SF TTKW+++VRTERGSDVII+LVGNK L K IEEGE K ++ ETSA+ Sbjct: 69 TAGQERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIIMLVGNKTDLADKRQVSIEEGERKAKELNVMFIETSAK 158 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |