FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 2.952e-17 Identity = 23/60 (38.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + ++Y +TIG+DF +T+ + +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68 HSP 2 Score: 53.9138 bits (128), Expect = 2.952e-17 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + +IVYDV ++SF N +W+ E+ +V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.954e-17 Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F+ T+ +TIGID KT+ L+ + ++LQ+W QE Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQE 69 HSP 2 Score: 50.8322 bits (120), Expect = 2.954e-17 Identity = 22/59 (37.29%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERF ++ SY R + ++VYD+ + +SF N +KW+ + DV +L+GNK Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNK 123
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RASEF_MOUSE (RAS and EF-hand domain-containing protein homolog OS=Mus musculus GN=Rasef PE=2 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 3.723e-17 Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFRS+ SY R + +++YDV +SFLN +WV+ V + I+LVGNK Sbjct: 484 TAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNVREWVDMVEDGTHRTIPIMLVGNK 542 HSP 2 Score: 53.1434 bits (126), Expect = 3.723e-17 Identity = 25/71 (35.21%), Postives = 40/71 (56.34%), Query Frame = 1 Query: 286 EKMAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 + + V++ YK+V GD +VGK+S + R ++F AT+G+DF KT+ ++ LQLW QE Sbjct: 418 DNTSKVTSQKAYKIVLAGDAAVGKSSFLMRLCKNEFQGNTSATLGVDFQMKTLIVDGEQTVLQLWDTAGQE 488
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 3.836e-17 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 3.836e-17 Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERFR++ SY R + ++VYDV SF N +W++E++ V +LVGNK L K Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEK 128
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 55.4546 bits (132), Expect = 3.839e-17 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ + +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68 HSP 2 Score: 53.5286 bits (127), Expect = 3.839e-17 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + +IVYDV +SF N +W+ E+ +V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RB18B_DANRE (Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 4.988e-17 Identity = 26/61 (42.62%), Postives = 40/61 (65.57%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLENWLNELETYCTRNDLVKMLVGNKI 124 HSP 2 Score: 52.373 bits (124), Expect = 4.988e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_CAEBR (Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18 PE=3 SV=1) HSP 1 Score: 55.8398 bits (133), Expect = 4.991e-17 Identity = 32/73 (43.84%), Postives = 44/73 (60.27%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSD-VIIVLVGNKLILWTKGSFIEEG 688 ++GQERFR+L PSY R + + VYDV SR SF W+ EV T +D VI ++V NK+ + + EEG Sbjct: 67 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKHWMTEVDTYCTNDNVIKMMVANKIDMPNRTVTREEG 139 HSP 2 Score: 52.7582 bits (125), Expect = 4.991e-17 Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 1 Query: 304 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 S L K++ +G+ VGK+S++ RF+ D FD ATIG+DF +M ++ V+L +W QE Sbjct: 7 SPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQE 71
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 4.991e-17 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ + +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 68 HSP 2 Score: 53.5286 bits (127), Expect = 4.991e-17 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + ++VYDV ++SF N +W+ E+ +V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RASEF_HUMAN (RAS and EF-hand domain-containing protein OS=Homo sapiens GN=RASEF PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 6.269e-17 Identity = 26/59 (44.07%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFRS+ SY R + +++YDV +SFLN +WV+ + V I+LVGNK Sbjct: 597 TAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAHETVPIMLVGNK 655 HSP 2 Score: 51.9878 bits (123), Expect = 6.269e-17 Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 1 Query: 304 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 S+ YK+V GD +VGK+S + R ++F AT+G+DF KT+ ++ LQLW QE Sbjct: 537 SSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTVLQLWDTAGQE 601
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 6.470e-17 Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWT-KGSFIEEGEAKL-VSSCYVYETSA 733 ++GQERFR++ +Y R + A++VYD+ R +F + +W++E++ + V +LVGNK L + +EEG+A + ETSA Sbjct: 68 TAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSA 156 HSP 2 Score: 53.5286 bits (127), Expect = 6.470e-17 Identity = 21/60 (35.00%), Postives = 43/60 (71.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V +GD +VGK+++++R+ ++F +ATIG++F +++M +E + V+ Q+W QE Sbjct: 13 FKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQE 72 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |