FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 6.878e-16 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 KL+ +GD VGK+ ++ RF D+F ++ TIGIDF +T+ + ++ V+LQ+W QE Sbjct: 13 KLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQE 71 HSP 2 Score: 52.373 bits (124), Expect = 6.878e-16 Identity = 28/75 (37.33%), Postives = 44/75 (58.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEA 694 ++GQERFR++ +Y R + ++VYDV +SF N W + V++ V ++LVGNK L K E+G+A Sbjct: 67 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQA 141
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB26_BOVIN (Ras-related protein Rab-26 OS=Bos taurus GN=RAB26 PE=2 SV=1) HSP 1 Score: 56.6102 bits (135), Expect = 8.862e-16 Identity = 23/60 (38.33%), Postives = 42/60 (70.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKL 652 ++GQERFRS+ +Y RD+ +++YDV ++ SF + W+ E++ DV+++L+GNK+ Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKV 179 HSP 2 Score: 47.7506 bits (112), Expect = 8.862e-16 Identity = 23/61 (37.70%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K++ +GD VGKT ++ RF F T+ +T+GIDF +K + ++ V+LQ+W QE Sbjct: 64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQE 124
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 57.7658 bits (138), Expect = 1.157e-15 Identity = 24/59 (40.68%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFRS+ +Y RD+ +++YD+ ++ SF N W+ E+ DV+I+L+GNK Sbjct: 86 TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144 HSP 2 Score: 46.2098 bits (108), Expect = 1.157e-15 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 K++ LGD VGKT + +F F T+ AT+GIDF +K + ++ V+LQ+W QE Sbjct: 31 KVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQE 90
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB4B_DANRE (Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.159e-15 Identity = 32/89 (35.96%), Postives = 53/89 (59.55%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK--LILWTKGSFIEEGEAKLVSSCYVYETSA 733 ++GQERFRS+ SY R ++ A++VYD+ SR+++ T W+ + RT +++I+L GNK L + +F+E + ETSA Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSA 152 HSP 2 Score: 44.2838 bits (103), Expect = 1.159e-15 Identity = 19/60 (31.67%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K + +G GK+ ++ +F+ +KF TIG++F S+ + + +TV+LQ+W QE Sbjct: 9 FKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1C_DICDI (Ras-related protein Rab-1C OS=Dictyostelium discoideum GN=Rab1C PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.510e-15 Identity = 22/59 (37.29%), Postives = 41/59 (69.49%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 K++ +GD VGK+ ++ RF ++F ++Y +TIG+DF +T+ L+ + ++LQ+W QE Sbjct: 35 KILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQE 93 HSP 2 Score: 49.2914 bits (116), Expect = 1.510e-15 Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERF+++ SY R + +IVYD+ S SF + +W+ +V V+ ++VGNK L +K Sbjct: 89 TAGQERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLKLIVGNKCDLNSK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 1.511e-15 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 KL+ +GD VGK+ ++ RF D F ++ TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 11 KLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQE 69 HSP 2 Score: 49.2914 bits (116), Expect = 1.511e-15 Identity = 21/59 (35.59%), Postives = 35/59 (59.32%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ +Y R + +++YDV ++SF N W V +V +L+GNK Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 53.9138 bits (128), Expect = 1.963e-15 Identity = 25/59 (42.37%), Postives = 38/59 (64.41%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 KL+ +GD VGK+ ++ RF F ++ ATIGIDF +T+ LE + ++LQ+W QE Sbjct: 17 KLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQE 75 HSP 2 Score: 49.2914 bits (116), Expect = 1.963e-15 Identity = 27/91 (29.67%), Postives = 48/91 (52.75%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCY---VYETSAR 736 ++GQERFR++ +Y R + ++VYDV +SF + W+ + V +L+GNK + T+ ++ K ++ Y ETSA+ Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRNWIRNIEQHASDSVNKMLIGNKCDM-TEKKVVDSSRGKSLADEYGIKFLETSAK 160
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1) HSP 1 Score: 55.0694 bits (131), Expect = 1.968e-15 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLW 480 +K V GD VGKTSI+ R D F T+ TIGI+F KT+Y+E + ++LQ+W Sbjct: 9 FKFVLAGDSGVGKTSILFRITDDTFTETH-ITIGIEFKIKTVYIEGKPIKLQIW 61 HSP 2 Score: 48.1358 bits (113), Expect = 1.968e-15 Identity = 22/59 (37.29%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++G++RFR + S+ R +IVYDV ++SF N W+E++R +VI +++GNK Sbjct: 63 TAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNK 120
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RB43L_HUMAN (Putative Rab-43-like protein ENSP00000330714 OS=Homo sapiens PE=5 SV=3) HSP 1 Score: 65.0846 bits (157), Expect = 1.973e-15 Identity = 26/59 (44.07%), Postives = 43/59 (72.88%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R ++ A++ YD+ R SFL+ W+E+VR GS+++ +L+GNK Sbjct: 43 TAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNK 101 HSP 2 Score: 38.1206 bits (87), Expect = 1.973e-15 Identity = 16/45 (35.56%), Postives = 26/45 (57.78%), Query Frame = 1 Query: 364 IITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 ++ RF F +TIG+DF KT+ ++ + V+LQ+W QE Sbjct: 3 VVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQE 47
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 55.4546 bits (132), Expect = 2.529e-15 Identity = 24/60 (40.00%), Postives = 40/60 (66.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKL 652 ++GQERFRS+ +Y RD+ +++YDV ++ SF N W+ E+ DV ++L+GNK+ Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179 HSP 2 Score: 47.3654 bits (111), Expect = 2.529e-15 Identity = 23/61 (37.70%), Postives = 38/61 (62.30%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKF-DNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K++ +GD VGKT ++ RF F T+ +T+GIDF +K + ++ V+LQ+W QE Sbjct: 64 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQE 124 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |