FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 4.147e-20 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQE 68 HSP 2 Score: 53.9138 bits (128), Expect = 4.147e-20 Identity = 27/90 (30.00%), Postives = 51/90 (56.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERF+++ +Y R + ++VYD+ +SF N W++ ++ + V +L+GNK + K ++E KL + +ETSA+ Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 65.0846 bits (157), Expect = 9.121e-20 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKG--SFIEEGEAKLVSSCYVYETSA 733 ++GQERFRS++ SY R S+ +VYDV +R+S+ + T W+ +V++ DV I+LVGNK L + +F+E + ETSA Sbjct: 63 TAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETSA 151 HSP 2 Score: 52.7582 bits (125), Expect = 9.121e-20 Identity = 23/59 (38.98%), Postives = 39/59 (66.10%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 K + +G QSVGK+ ++ RF+ +KF + TIG+DF S+ + ++ + V+LQ+W QE Sbjct: 9 KFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQE 67
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB6C_HUMAN (Ras-related protein Rab-6C OS=Homo sapiens GN=RAB6C PE=2 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.099e-19 Identity = 49/73 (67.12%), Postives = 56/73 (76.71%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQESHS*LHQRFL 528 L K+KLVFLG+QSV KTS+ITRF YD FDNTYQA IGIDFLSKTMYLED T+ L+LW QE L R++ Sbjct: 11 LRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDTAGQERLRSLIPRYI 83 HSP 2 Score: 93.5893 bits (231), Expect = 1.215e-18 Identity = 47/76 (61.84%), Postives = 58/76 (76.32%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAK 697 ++GQER RSLIP YIRDS+ AV+VYD+ + SF TTKW+++VRTERGSDVII LVGN+ L K +EEGE K Sbjct: 69 TAGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADKRQVSVEEGERK 144
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RABA_DICDI (Ras-related protein RabA OS=Dictyostelium discoideum GN=rabA PE=2 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 1.187e-19 Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K +F+GD VGK+SI+ RF D F +Y +TIG+DF KT+Y+E + ++LQ+W QE Sbjct: 9 FKFIFVGDSGVGKSSILLRFTEDTFTESYISTIGVDFKIKTVYIEGKAIKLQIWDTAGQE 68 HSP 2 Score: 50.8322 bits (120), Expect = 1.187e-19 Identity = 23/59 (38.98%), Postives = 36/59 (61.02%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR S R ++VYDV ++SF N KW++E+ +VI +++GNK Sbjct: 64 TAGQERFRVHNNSQYRGCHAVMVVYDVTDQRSFENVAKWIQEIERYARDNVIKMIIGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.001e-19 Identity = 27/59 (45.76%), Postives = 42/59 (71.19%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ Y R + A+IVYD+ S+ SF N T+W+ E+R D++I++VGNK Sbjct: 66 TAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAEQDILIMMVGNK 124 HSP 2 Score: 54.6842 bits (130), Expect = 2.001e-19 Identity = 22/60 (36.67%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V +GD +VGK++++ RF ++F +ATIG+DF +K++ ++++T+ Q W QE Sbjct: 11 FKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQE 70
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.008e-19 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 68 HSP 2 Score: 51.9878 bits (123), Expect = 2.008e-19 Identity = 27/90 (30.00%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERF+++ +Y R + ++VYD+ +SF N W++ ++ + V +L+GNK + K +E KL + +ETSA+ Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 2.008e-19 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT +I RF D F+NTY +TIGIDF +T+ +E + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQE 68 HSP 2 Score: 51.9878 bits (123), Expect = 2.008e-19 Identity = 27/90 (30.00%), Postives = 50/90 (55.56%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERF+++ +Y R + ++VYD+ +SF N W++ ++ + V +L+GNK + K +E KL + +ETSA+ Sbjct: 64 TAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 2.612e-19 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 HSP 2 Score: 58.151 bits (139), Expect = 2.612e-19 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERFR++ SY R + ++VYDV R+S+ N +W++E+ +V +LVGNK L TK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 58.151 bits (139), Expect = 4.415e-19 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71 HSP 2 Score: 57.3806 bits (137), Expect = 4.415e-19 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERFR++ SY R + ++VYDV ++SF N +W++E+ +V +LVGNK L TK Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK 131
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 58.151 bits (139), Expect = 4.415e-19 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71 HSP 2 Score: 57.3806 bits (137), Expect = 4.415e-19 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERFR++ SY R + ++VYDV ++SF N +W++E+ +V +LVGNK L TK Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTK 131 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |