FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8B_HUMAN (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2) HSP 1 Score: 59.6918 bits (143), Expect = 2.776e-18 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 2.776e-18 Identity = 29/90 (32.22%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + SDV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RYL2_YARLI (Ras-like GTP-binding protein RYL2 OS=Yarrowia lipolytica GN=RYL2 PE=3 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 2.776e-18 Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLIL 658 ++GQERFRS+ P Y R +S ++ YDV SR SF W+ E++ SD+II +VG K+ L Sbjct: 61 TAGQERFRSMAPIYYRSASCGILCYDVTSRASFDAMHLWLLELKQNLSSDIIIHIVGTKVDL 122 HSP 2 Score: 55.0694 bits (131), Expect = 2.776e-18 Identity = 27/59 (45.76%), Postives = 36/59 (61.02%), Query Frame = 1 Query: 322 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 K+V LG Q VGKT +TR++ +KF +TIG F K + + D TVRLQ+W QE Sbjct: 7 KIVLLGAQGVGKTCFVTRYVNNKFQAGQASTIGASFSRKRVVVNDTTVRLQIWDTAGQE 65
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 3.610e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD SVGK+ + RF D + ++Y +TIG+DF +T+ +E +TV+LQ+W QE Sbjct: 9 FKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 3.610e-18 Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + +IVYD+ +SF N +W++E+ V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 3.614e-18 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 HSP 2 Score: 54.299 bits (129), Expect = 3.614e-18 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSARLA 742 ++GQERFR++ SY R + ++VYDV ++SF N +W+ E+ +V +LVGNK L K + + S + ETSA+ A Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLHEIDRYACENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNA 155
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 3.616e-18 Identity = 27/60 (45.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF KT+ L+ + ++LQ+W QE Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQE 69 HSP 2 Score: 51.6026 bits (122), Expect = 3.616e-18 Identity = 28/92 (30.43%), Postives = 53/92 (57.61%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVS---SCYVYETSARL 739 ++GQERF ++ SY R + ++VYD+ + +SF N +KW+ + DV +L+GNK + K + +G+ + ++ +ETSA++ Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDDK-RVVPKGKGEQIAREHGIRFFETSAKV 155
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 3.616e-18 Identity = 27/60 (45.00%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF KT+ L + ++LQ+W QE Sbjct: 10 FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQE 69 HSP 2 Score: 52.373 bits (124), Expect = 3.616e-18 Identity = 31/95 (32.63%), Postives = 51/95 (53.68%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK-------LILWTKGSFIEEGEAKLVSSCYVYETSAR 736 ++GQERF ++ SY R + ++VYD+ + +SF N +KW+ + DV +L+GNK ++L +KG I A +ETSA+ Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHA-----IRFFETSAK 154
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 4.694e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 51.6026 bits (122), Expect = 4.694e-18 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + +DV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 60.4622 bits (145), Expect = 4.694e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 51.6026 bits (122), Expect = 4.694e-18 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + +DV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.694e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 51.6026 bits (122), Expect = 4.694e-18 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + +DV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 4.694e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 51.6026 bits (122), Expect = 4.694e-18 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + +DV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAK 153 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |