FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 60.4622 bits (145), Expect = 6.103e-18 Identity = 26/60 (43.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F++T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 51.2174 bits (121), Expect = 6.103e-18 Identity = 28/90 (31.11%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N W+ + +DV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVNDKRQVSKERGEKLALDYGIKFMETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 7.945e-18 Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T LE +TV+LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQE 68 HSP 2 Score: 51.9878 bits (123), Expect = 7.945e-18 Identity = 25/59 (42.37%), Postives = 37/59 (62.71%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + +IVYDV + SF N +W++E+ V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNK 122
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 58.151 bits (139), Expect = 7.945e-18 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 7.945e-18 Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQER R++ SY R + ++VYDV ++S+ N +W++E+ +V +LVGNK L TK Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTK 128
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB35_RAT (Ras-related protein Rab-35 OS=Rattus norvegicus GN=Rab35 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 7.945e-18 Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ +Y R + ++VYDV S +SF+N +W+ E+ + DV +LVGNK Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121 HSP 2 Score: 55.0694 bits (131), Expect = 7.945e-18 Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+S++ RF + F +Y TIG+DF +T+ + V+LQ+W QE Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB35_MOUSE (Ras-related protein Rab-35 OS=Mus musculus GN=Rab35 PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 7.945e-18 Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ +Y R + ++VYDV S +SF+N +W+ E+ + DV +LVGNK Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121 HSP 2 Score: 55.0694 bits (131), Expect = 7.945e-18 Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+S++ RF + F +Y TIG+DF +T+ + V+LQ+W QE Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB35_HUMAN (Ras-related protein Rab-35 OS=Homo sapiens GN=RAB35 PE=1 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 7.945e-18 Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ +Y R + ++VYDV S +SF+N +W+ E+ + DV +LVGNK Sbjct: 64 TAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEI-NQNCDDVCRILVGNK 121 HSP 2 Score: 55.0694 bits (131), Expect = 7.945e-18 Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+S++ RF + F +Y TIG+DF +T+ + V+LQ+W QE Sbjct: 9 FKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB31_RAT (Ras-related protein Rab-31 OS=Rattus norvegicus GN=Rab31 PE=2 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 7.959e-18 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERF SL P Y R S+ AVIVYD+ + SF KWV+E++ ++++ + GNK Sbjct: 61 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNK 119 HSP 2 Score: 50.447 bits (119), Expect = 7.959e-18 Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 307 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG F++KT+ + + +W QE Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB31_MOUSE (Ras-related protein Rab-31 OS=Mus musculus GN=Rab31 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 7.959e-18 Identity = 26/59 (44.07%), Postives = 39/59 (66.10%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERF SL P Y R S+ AVIVYD+ + SF KWV+E++ ++++ + GNK Sbjct: 61 TAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNK 119 HSP 2 Score: 50.447 bits (119), Expect = 7.959e-18 Identity = 24/64 (37.50%), Postives = 37/64 (57.81%), Query Frame = 1 Query: 307 ALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 A+ + K+ LGD VGK+SI+ RF+ D FD+ TIG F++KT+ + + +W QE Sbjct: 2 AIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 65
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.031e-17 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT ++ RF D F+ T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDTAGQE 68 HSP 2 Score: 51.2174 bits (121), Expect = 1.031e-17 Identity = 29/90 (32.22%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + + VYD+ + +SF N W+ + SDV +++GNK + K +E KL + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNEKRQVSKERGEKLAIDYGIKFLETSAK 153
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 1.032e-17 Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGKT + RF D F+ T+ +TIGIDF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 1.032e-17 Identity = 30/90 (33.33%), Postives = 48/90 (53.33%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEEGEAKLVSSCYV--YETSAR 736 ++GQERFR++ +Y R + ++VYD+ + +SF N WV + DV +++GNK K E KL +S + ETSA+ Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDANDKRQVSREQGEKLAASFGIKFMETSAK 153 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |