FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB30_MOUSE (Ras-related protein Rab-30 OS=Mus musculus GN=Rab30 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.033e-17 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEE--GEAKLVSSCYVYETSAR 736 ++GQERFRS+ SY R ++ ++ YD+ +SF +W+ E+ + VI VLVGNK+ L + ++ E Y ETSA+ Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154 HSP 2 Score: 51.9878 bits (123), Expect = 1.033e-17 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V +G+ VGKT ++ RF F ATIG+DF+ KT+ + V+LQ+W QE Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB30_HUMAN (Ras-related protein Rab-30 OS=Homo sapiens GN=RAB30 PE=1 SV=2) HSP 1 Score: 58.9214 bits (141), Expect = 1.033e-17 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEE--GEAKLVSSCYVYETSAR 736 ++GQERFRS+ SY R ++ ++ YD+ +SF +W+ E+ + VI VLVGNK+ L + ++ E Y ETSA+ Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154 HSP 2 Score: 51.9878 bits (123), Expect = 1.033e-17 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V +G+ VGKT ++ RF F ATIG+DF+ KT+ + V+LQ+W QE Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB30_BOVIN (Ras-related protein Rab-30 OS=Bos taurus GN=RAB30 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.033e-17 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSFIEE--GEAKLVSSCYVYETSAR 736 ++GQERFRS+ SY R ++ ++ YD+ +SF +W+ E+ + VI VLVGNK+ L + ++ E Y ETSA+ Sbjct: 65 TAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMYYLETSAK 154 HSP 2 Score: 51.9878 bits (123), Expect = 1.033e-17 Identity = 24/60 (40.00%), Postives = 36/60 (60.00%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V +G+ VGKT ++ RF F ATIG+DF+ KT+ + V+LQ+W QE Sbjct: 10 FKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQE 69
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 1.033e-17 Identity = 24/60 (40.00%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ +T++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 1.033e-17 Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERF ++ SY R + ++VYDV ++S+ N +W++E+ +V +LVGNK L TK Sbjct: 64 TAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTK 128
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.033e-17 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQE 68 HSP 2 Score: 54.6842 bits (130), Expect = 1.033e-17 Identity = 26/65 (40.00%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTK 667 ++GQERFR++ SY R + ++VYDV ++SF N +W+ E+ +V +LVGNK L +K Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSK 128
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB21_RAT (Ras-related protein Rab-21 OS=Rattus norvegicus GN=Rab21 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 1.740e-17 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVS-SCYVYETSAR 736 ++GQERF +L P Y RDS+ A++VYDV SF WV+E+R G+++ + +VGNK+ L + I+E E+ S Y TSA+ Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162 HSP 2 Score: 46.595 bits (109), Expect = 1.740e-17 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V LG+ VGKTS++ R+ +KF++ + T+ FL+K + + + V L +W QE Sbjct: 18 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 77
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB21_MOUSE (Ras-related protein Rab-21 OS=Mus musculus GN=Rab21 PE=1 SV=4) HSP 1 Score: 63.5438 bits (153), Expect = 1.740e-17 Identity = 36/90 (40.00%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVS-SCYVYETSAR 736 ++GQERF +L P Y RDS+ A++VYDV SF WV+E+R G+++ + +VGNK+ L + I+E E+ S Y TSA+ Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDVTDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162 HSP 2 Score: 46.595 bits (109), Expect = 1.740e-17 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V LG+ VGKTS++ R+ +KF++ + T+ FL+K + + + V L +W QE Sbjct: 18 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 77
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB21_HUMAN (Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 2.261e-17 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVS-SCYVYETSAR 736 ++GQERF +L P Y RDS+ A++VYD+ SF WV+E+R G+++ + +VGNK+ L + I+E E+ S Y TSA+ Sbjct: 75 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 164 HSP 2 Score: 46.595 bits (109), Expect = 2.261e-17 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V LG+ VGKTS++ R+ +KF++ + T+ FL+K + + + V L +W QE Sbjct: 20 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 79
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB21_CANFA (Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3) HSP 1 Score: 63.1586 bits (152), Expect = 2.263e-17 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVS-SCYVYETSAR 736 ++GQERF +L P Y RDS+ A++VYD+ SF WV+E+R G+++ + +VGNK+ L + I+E E+ S Y TSA+ Sbjct: 73 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAK 162 HSP 2 Score: 46.595 bits (109), Expect = 2.263e-17 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V LG+ VGKTS++ R+ +KF++ + T+ FL+K + + + V L +W QE Sbjct: 18 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 77
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_CAEEL (Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=2 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.271e-17 Identity = 32/73 (43.84%), Postives = 45/73 (61.64%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVII-VLVGNKLILWTKGSFIEEG 688 ++GQERFR+L PSY R + + VYDV SR SF W++EV T +D II ++V NK+ + + EEG Sbjct: 67 TAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKMMVANKIDMPNRVVTREEG 139 HSP 2 Score: 52.7582 bits (125), Expect = 2.271e-17 Identity = 25/65 (38.46%), Postives = 39/65 (60.00%), Query Frame = 1 Query: 304 SALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 S L K++ +G+ VGK+S++ RF+ D FD ATIG+DF +M ++ V+L +W QE Sbjct: 7 SPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |