FC931332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB12_MOUSE (Ras-related protein Rab-12 OS=Mus musculus GN=Rab12 PE=1 SV=3) HSP 1 Score: 58.151 bits (139), Expect = 2.933e-17 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 280 RSEKMAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 R K P A K +++ +G + VGKTS++ RF D F ++T+G+DF KT+ L + +RLQ+W QE Sbjct: 29 RRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101 HSP 2 Score: 51.2174 bits (121), Expect = 2.933e-17 Identity = 21/60 (35.00%), Postives = 38/60 (63.33%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKL 652 ++GQERF S+ +Y R + ++VYD+ +++F + KW++ + D ++LVGNKL Sbjct: 97 TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKL 156
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 58.151 bits (139), Expect = 2.933e-17 Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 1 Query: 280 RSEKMAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 R K P A K +++ +G + VGKTS++ RF D F ++T+G+DF KT+ L + +RLQ+W QE Sbjct: 30 RRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102 HSP 2 Score: 51.2174 bits (121), Expect = 2.933e-17 Identity = 21/60 (35.00%), Postives = 38/60 (63.33%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKL 652 ++GQERF S+ +Y R + ++VYD+ +++F + KW++ + D ++LVGNKL Sbjct: 98 TAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKL 157
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.942e-17 Identity = 35/90 (38.89%), Postives = 54/90 (60.00%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNKLILWTKGSF-IEEGEAKLVS-SCYVYETSAR 736 ++GQERF +L P Y RDS+ A++VYD+ SF WV+E+R G+++ + +VGNK+ L + I+E E+ S Y TSA+ Sbjct: 72 TAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAK 161 HSP 2 Score: 46.595 bits (109), Expect = 2.942e-17 Identity = 21/60 (35.00%), Postives = 37/60 (61.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +K+V LG+ VGKTS++ R+ +KF++ + T+ FL+K + + + V L +W QE Sbjct: 17 FKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQE 76
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_RAT (Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_PONAB (Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_MOUSE (Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_HUMAN (Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: RAB18_BOVIN (Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 2.951e-17 Identity = 26/61 (42.62%), Postives = 41/61 (67.21%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTE-RGSDVIIVLVGNKL 652 ++GQERFR+L PSY R + ++VYDV R +F+ W+ E+ T +D++ +LVGNK+ Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKI 124 HSP 2 Score: 51.9878 bits (123), Expect = 2.951e-17 Identity = 24/63 (38.10%), Postives = 37/63 (58.73%), Query Frame = 1 Query: 310 LAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 L K++ +G+ VGK+S++ RF D FD ATIG+DF KT+ ++ +L +W QE Sbjct: 6 LTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
BLAST of FC931332 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 2.952e-17 Identity = 23/60 (38.33%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 319 YKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWTREIQE 498 +KL+ +GD VGK+ ++ RF D + +Y +TIG+DF +T+ L+ + ++LQ+W QE Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQE 68 HSP 2 Score: 53.1434 bits (126), Expect = 2.952e-17 Identity = 24/59 (40.68%), Postives = 38/59 (64.41%), Query Frame = 2 Query: 473 SSGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTTKWVEEVRTERGSDVIIVLVGNK 649 ++GQERFR++ SY R + ++VYDV ++SF N +W+ E+ +V +LVGNK Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLAEIDRYASENVNKLLVGNK 122 The following BLAST results are available for this feature:
BLAST of FC931332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931332 ID=FC931332; Name=FC931332; organism=Citrus clementina; type=EST; length=743bpback to top |