FC931613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.937e-51 Identity = 96/179 (53.63%), Postives = 125/179 (69.83%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ AVL++ + G QT+EH LA TLGV Q+I NKMDAT P Y + RY+E+ +EV L+ VGY ++VPF+P+S + GDN+++ S WY GPT+LDAL+ + EP++P + PLR+P+QDVY I G+GTVPVGRVETGVL Sbjct: 82 TDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLARTLGVNQLIVAINKMDATEPPYDEKRYNEVKEEVGKLLRMVGYKIDEVPFIPVSAYNGDNVVKHSDRTKWYTGPTVLDALNALKEPQKPVNLPLRIPVQDVYSISGVGTVPVGRVETGVL 253
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.530e-51 Identity = 100/182 (54.95%), Postives = 127/182 (69.78%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T KY+ DAP H+DFVKNMITG SQA+ A+L++ + G FEAGIS GQTREH LA T+GV Q++ NKMD T YSK RY+EI ++ L+ VGY +++PF+P S +EG N+ +R+ WY GP L +A D EP RP DKPLR+P+QDVY I G+GTVPVGRVETGVL + Sbjct: 82 TKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKEGEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMD--TVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKV 261
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.530e-51 Identity = 106/209 (50.72%), Postives = 136/209 (65.07%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNPE--------------------------KVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T K+ DAP H+DF+KNMITGTSQA+ A+L+ID +FEAGI++ G T+EHALLA+TLGVKQ+ NKMD K +++ RY+E+V + L K+G+ + FVPISG+ GDNM+E+STN+ WY GPTL + LD + PKRP++ PLRLPLQDVYKIGGIGTVPVGRVETG+L Sbjct: 82 TAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDGN--NFEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPPKRPTEDPLRLPLQDVYKIGGIGTVPVGRVETGIL 288
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 3.304e-51 Identity = 98/181 (54.14%), Postives = 133/181 (73.48%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T KYY DAP H+DFVKNMITGTSQA+ AVL++ + G G+ QT+EHA LA TLGV Q+I NKMDAT P YS+ R++E+ E++ L +G+ + VP +P+SG++GDN+++ S NL W+KGPTL++AL+ + P +P DKPLRLP++DVY I GIGTVPVGR+ETGV+ + Sbjct: 82 TDKYYFTIIDAPGHRDFVKNMITGTSQADAAVLVVSAREGE---GVM--AQTKEHAFLARTLGVPQLIAVVNKMDATQPPYSEKRFNEVKDEITKLLTPIGF--KNVPIIPLSGYKGDNIMKPSPNLSWWKGPTLMEALNALQVPAKPVDKPLRLPVEDVYSITGIGTVPVGRIETGVMKV 255
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 2.142e-50 Identity = 92/179 (51.40%), Postives = 127/179 (70.95%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KY+ DAP H+DF+KNMITG S+A+CA+L++ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ +K VGY E VPF+P+SG++GDN+++RS N+ WYKG TLL++ D+ ++P KPLR+P+QDVY I G+GTVPVGRVETG + Sbjct: 86 TPKYFFTLIDAPGHRDFIKNMITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEKGEGLVKSVGYKLENVPFIPVSGWKGDNLVKRSENMPWYKGKTLLESFDDFKMAEKPVGKPLRVPIQDVYTITGVGTVPVGRVETGTM 262
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 2.797e-50 Identity = 100/179 (55.87%), Postives = 129/179 (72.07%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY DAP H+DFVKNMITGTSQA+ A+L+I + G G+ + QTREHA LA TLGV Q++ NKMDAT P +S+ R++E+ + LK +GY + FVPISG++GDN+ + S N+ WYKGP+LL ALD P++P +KPLR+P++DVY I GIGTVPVGRVETGVL Sbjct: 82 TDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREGE---GVME--QTREHAFLARTLGVPQIVVAINKMDATEPPFSEKRFNEVKADAEKLLKTIGY--KDATFVPISGYKGDNVTKPSPNMPWYKGPSLLQALDAFKVPEKPINKPLRVPVEDVYSITGIGTVPVGRVETGVL 253
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 3.653e-50 Identity = 94/179 (52.51%), Postives = 129/179 (72.07%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ A+L++ + G E QT+EH L+ TLG+ Q+I NKMDA KY + RY+E+ +++S LK VGY P+ + F+P+S F GDN+ ++S N WYKGPT+LDAL+ ++EP++P++ P+RLP+QDVY I GIGTVPVGRVETG++ Sbjct: 82 TDKYYFTVVDCPGHRDFVKNMITGASQADAALLVVAAPDGVME-------QTKEHVFLSRTLGINQLIIGINKMDAA--KYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKKSENTPWYKGPTVLDALNALSEPEKPTNLPMRLPIQDVYSISGIGTVPVGRVETGIM 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.813e-49 Identity = 93/181 (51.38%), Postives = 124/181 (68.51%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T KY+ D P H+DFVKNMI G SQA+ A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ KVPF+P+S GDN+ +S+N+ WY GP LL+ALD I P RP DKPLRLP+QDV+ I G GTV GRVE+GV+ + Sbjct: 91 TPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVVN--YDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVITGRVESGVVKV 269
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.093e-49 Identity = 93/181 (51.38%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T K + D P H+DFVKNMI G SQA+ A+ +I + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ EVS LK +GY+P K+ FVP+S +GDN+ +S N WY+GPTLL+ LD P RP+DKPLR+P+QDV+ I G GTV VGRVETGVL + Sbjct: 92 TQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFVPVSAIKGDNVRTKSPNTPWYQGPTLLEVLDTFQPPPRPTDKPLRMPIQDVFSITGAGTVVVGRVETGVLKV 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 194.126 bits (492), Expect = 4.039e-49 Identity = 93/179 (51.96%), Postives = 119/179 (66.48%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T K + D P H+DFVKNMI G SQA+ A+ +I + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS LK +GY+P K+ FVP+S +GDN+ +S+N WY GPTLL+ LD P RP+DKPLRLP+QDV+ I G GTV VGRVETGVL Sbjct: 92 TNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVVN--YDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKSSNTPWYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITGAGTVVVGRVETGVL 268 The following BLAST results are available for this feature:
BLAST of FC931613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931613 ID=FC931613; Name=FC931613; organism=Citrus clementina; type=EST; length=573bpback to top |