FC931613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2) HSP 1 Score: 349.747 bits (896), Expect = 1.730e-96 Identity = 167/179 (93.30%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260 HSP 2 Score: 24.2534 bits (51), Expect = 1.730e-96 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 2.945e-96 Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+ Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVI 260 HSP 2 Score: 24.2534 bits (51), Expect = 2.945e-96 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1) HSP 1 Score: 347.821 bits (891), Expect = 6.538e-96 Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARY+EIVKEVSSYLKKVGYNP+KVPFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+ Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKKVGYNPDKVPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVI 260 HSP 2 Score: 24.2534 bits (51), Expect = 6.538e-96 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 1.113e-95 Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD I EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG+L Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQIQEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGIL 260 HSP 2 Score: 24.2534 bits (51), Expect = 1.113e-95 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2) HSP 1 Score: 348.206 bits (892), Expect = 1.673e-95 Identity = 166/179 (92.74%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALL+FTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLLDALD I+EPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLSFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQISEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 2.855e-95 Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI+KEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG++ Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMI 260
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 3.223e-95 Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLL+ALD IN+ KRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINDAKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 260 HSP 2 Score: 24.2534 bits (51), Expect = 3.223e-95 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1) HSP 1 Score: 344.354 bits (882), Expect = 7.156e-95 Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 TTKYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNP+K+ FVPISGFEGDNMIERSTNLDWYKGPTLL+ALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGV+ Sbjct: 82 TTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIHFVPISGFEGDNMIERSTNLDWYKGPTLLEALDLINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVI 260 HSP 2 Score: 24.2534 bits (51), Expect = 7.156e-95 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.085e-94 Identity = 164/179 (91.62%), Postives = 172/179 (96.09%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T+KYYC DAP H+DF+KNMITGTSQA+CAVLIIDSTTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSK RY+EIVKEVSSYLKKVGYNP+K+PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIG VPVGRVETGV+ Sbjct: 82 TSKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKGRYEEIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGIVPVGRVETGVV 260
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A1_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=3 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.589e-94 Identity = 164/179 (91.62%), Postives = 169/179 (94.41%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYYC DAP H+DF+KNMITGTSQA+CAVLIID TTG FEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK+ FVPISGFEGDNMIERSTNLDWYKGPTLLDALD INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETG + Sbjct: 82 TNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDPTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKIAFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGTI 260 HSP 2 Score: 24.2534 bits (51), Expect = 1.589e-94 Identity = 9/10 (90.00%), Postives = 10/10 (100.00%), Query Frame = 1 Query: 538 QPGMVVTFGP 567 +PGMVVTFGP Sbjct: 261 KPGMVVTFGP 270 The following BLAST results are available for this feature:
BLAST of FC931613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931613 ID=FC931613; Name=FC931613; organism=Citrus clementina; type=EST; length=573bpback to top |