FC931613
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 8.998e-49 Identity = 93/181 (51.38%), Postives = 120/181 (66.30%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T K + D P H+DF+KNMI G SQA+ A+ +I + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS LK +GY+P K+ F+P+S +GDN+ +S+N WY GPTLL+ALD P RP DKPLR+P+QDV+ I G GTV VGRVETGVL + Sbjct: 92 TNKLFITIIDLPGHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIVN--YDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKSSNTPWYNGPTLLEALDTFQPPPRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKV 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.175e-48 Identity = 92/181 (50.83%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T K + D P H+DFVKNMI G SQA+ A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS LK +GY+P K+ F+P+S +GDN+ +S+N WY GPTLL+ D+ P+RP DKPLR+P+QDV+ I G GTV VGRVETGVL + Sbjct: 92 TNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKSSNTPWYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKV 270
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.535e-48 Identity = 91/179 (50.84%), Postives = 125/179 (69.83%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T K+Y D P H+DFVKNMITG SQA+ AVL++ + G QT+EH L+ TLG+ Q+I NKMDA YS+ARY E+V++VS LK +G+ P ++PF+P S F GDN+++ S WYKGP +++AL+++ EP++PS PLR+P++D Y I GIGTVPVGRVETGV+ Sbjct: 82 TDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAVD--YSEARYKEVVEQVSGILKMIGFKPSEIPFIPTSAFHGDNIMKLSDKTPWYKGPAIMEALNSLKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVM 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 2.005e-48 Identity = 93/179 (51.96%), Postives = 122/179 (68.16%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ AV+++ + G E QT+EH L+ TLG+KQ+I NKMDA Y +AR++++ +V + LK VG NP+ V F+PIS FEGDN+ + S + WYKG TL LD + P +P++KPLR+P+QD Y I GIGTVPVGRVETG+L Sbjct: 82 TDKYYFTVVDCPGHRDFVKNMITGASQADAAVIVVAAPDGVME-------QTKEHVFLSKTLGIKQLIVAVNKMDAAN--YDEARFNQVKSDVGALLKMVGTNPDTVKFIPISAFEGDNITKNSDKMPWYKGKTLFGLLDELEVPDKPTEKPLRVPIQDAYSISGIGTVPVGRVETGIL 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 2.618e-48 Identity = 91/179 (50.84%), Postives = 122/179 (68.16%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ A+L++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+A+Y E+V++VS LK +G+ P +PF+P S F GDN+ + S WYKGP ++ ALD + EP++PS PLR+P++D Y I GIGTVPVGRVETGV+ Sbjct: 82 TPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVM-------AQTKEHIFLSRTLGINQLIIAINKMDAV--EYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNITKLSEKTPWYKGPVIMQALDELKEPEKPSTLPLRIPVEDAYTISGIGTVPVGRVETGVM 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 3.419e-48 Identity = 94/179 (52.51%), Postives = 120/179 (67.04%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ A+L++ + G E QT+EH LA TLG+ Q+I NKMDA K+ + R++E+ KE+S +K VGY PE+ F+PIS +G N+ S WYKGP L+ ALD EP +P+DKPLRLP+QD Y I GIGTVPVGRVETG++ Sbjct: 82 TPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVME-------QTKEHVFLARTLGITQIIIAINKMDAV--KFDEKRFNEVKKELSDLIKMVGYKPEETLFIPISSLQGINIKANSPETPWYKGPALIPALDTFKEPSKPTDKPLRLPIQDSYSISGIGTVPVGRVETGIM 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 5.832e-48 Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KYY D P H+DFVKNMITG SQA+ AVL++ + G QT+EH L+ TLG+ Q+I NKMDA KYS+ RY+E+ KEVS L VG+ + VPF+P S FEGDN+ + S N WY GP LL+ L+N+ P +P PLR+P+QD Y I GIGTVPVGRVETG++ Sbjct: 81 TDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHVFLSRTLGINQLIVAINKMDAA--KYSEDRYNEVKKEVSQLLGMVGFKADDVPFIPTSAFEGDNITKSSANTPWYTGPALLECLNNLTVPSKPDTLPLRIPVQDAYTISGIGTVPVGRVETGIM 250
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 9.948e-48 Identity = 94/179 (52.51%), Postives = 119/179 (66.48%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KY D P H+DFVKNMITG SQA+ A++++ T G E QT+EH L+ TLG+ Q+I NKMDA YS+ +Y+E +++ + VG+ P + PF+PIS F GDN+ E S N WYKGPTLL ALD P P+DKPLRLP+QDVY I G+GTVPVGRVETG+L Sbjct: 82 TPKYNFTVVDCPGHRDFVKNMITGASQADAAIIVVSGTEGPME-------QTKEHVFLSKTLGINQIIVAINKMDAVN--YSEEKYNEAKDKMTKLIMSVGFKPAETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGIL 251
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.299e-47 Identity = 94/180 (52.22%), Postives = 127/180 (70.56%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVL 538 T KY D P H+DF+KNMITG SQA+ AVL++D + GI QTREH LA TLG+KQ+ NKMD T YS+ Y+++ K +S L KV GYNP+++ F+P + +GDN+++RS N+ WYKGPTL++ALD P++P++ PLR+P+QDVY I G+GTVPVGRVETG+L Sbjct: 82 TQKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVD--VNDAKTGIQP--QTREHMFLARTLGIKQIAVAINKMD--TVNYSQEEYEKMKKMLSEQLLKVLGYNPDQIDFIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSITGVGTVPVGRVETGIL 255
BLAST of FC931613 vs. ExPASy Swiss-Prot
Match: EF1A_THESM (Elongation factor 1-alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=tuf PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.216e-47 Identity = 95/181 (52.49%), Postives = 126/181 (69.61%), Query Frame = 2 Query: 2 TTKYYCAGFDAPEHQDFVKNMITGTSQAECAVLIIDSTTGSFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLSL 544 T Y DAP H+DFVKNMITG SQA+ AVLI+ +T G QT+EHA LA TLG+ +I NKMDA KY + R+ E+ +V+ L+ +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP++P+DKPLR+P+QDVY I G+GTVPVGRVETGVL + Sbjct: 80 TPHRYITIIDAPGHRDFVKNMITGASQADAAVLIVAATDGVMP-------QTKEHAFLARTLGINHIIVGVNKMDAV--KYDEKRFKEVATQVTKLLQMLGY--KNFPVIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKV 249 The following BLAST results are available for this feature:
BLAST of FC931613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931613 ID=FC931613; Name=FC931613; organism=Citrus clementina; type=EST; length=573bpback to top |