FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICFE (30S ribosomal protein S16 OS=Rickettsia felis GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACLM (30S ribosomal protein S16 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDGK +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MSVKIRLTRMGSKKKPFYRINVADSRAPRDGKFIETVGTYNPLVTEN---QVTLKEERVLEWLSNGAQPSDTVRNLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_EHRCJ (30S ribosomal protein S16 OS=Ehrlichia canis (strain Jake) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYRV+ ADSR RDGK +E LG+YNP+ ++ + + DR+KYWLSVGAQ +D V Sbjct: 1 MSVKIRLARFGAKKRPFYRVVVADSRVSRDGKFIESLGFYNPMLPKEHELFVKVKVDRLKYWLSVGAQATDRV 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOBB (30S ribosomal protein S16 OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R GCK PFYR++ ADSRSPRDG+ +E +GYYNP+ K +N ++ WL GAQP+D V+++ +AGL Sbjct: 1 MAVKIRLRRMGCKKAPFYRIVVADSRSPRDGRFIEEIGYYNPITEPAEVK---INEEKASKWLQDGAQPTDVVKKLFTQAGL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOBA (30S ribosomal protein S16 OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.888e-17 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R GCK PFYR++ ADSRSPRDG+ +E +GYYNP+ K +N ++ WL GAQP+D V+++ +AGL Sbjct: 1 MAVKIRLRRMGCKKAPFYRIVVADSRSPRDGRFIEEIGYYNPITEPAEVK---INEEKASKWLQDGAQPTDVVKKLFTQAGL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RT16_YEAST (37S ribosomal protein S16, mitochondrial OS=Saccharomyces cerevisiae GN=MRPS16 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP----------GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +VRIRLARFG KN P Y ++ A+SR RD K +EVLG Y P+P G K + L+FDR KYW+ VGAQPS+ V ++L +AG+L Sbjct: 5 LVRIRLARFGRKNSPVYNIVVANSRKARDAKPIEVLGTYVPVPSPVTKRELKRGVVPIKDVKLDFDRTKYWIGVGAQPSETVTKLLRKAGIL 96
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICPR (30S ribosomal protein S16 OS=Rickettsia prowazekii GN=rpsP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVIANATAPRDGDFLEKVGTYNPMLASDNSERVILKKDRIEYWLGTGAKPTERVAKFIEKAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACLS (30S ribosomal protein S16 OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDGK +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MSVKIRLTRMGSKKKPFYRINVADSRAPRDGKFIETVGTYNPLLTEN---QVTLKEERVLEWLSNGAQPSDTVRNLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_EHRCR (30S ribosomal protein S16 OS=Ehrlichia chaffeensis (strain Arkansas) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.690e-17 Identity = 41/73 (56.16%), Postives = 54/73 (73.97%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYRV+ ADSR RDGK +E LG+YNP+ ++ + + DR+KYWLSVGAQ +D + Sbjct: 1 MSVKIRLARFGAKKRPFYRVVVADSRVARDGKFIESLGFYNPMLPKEHELFVKVKVDRLKYWLSVGAQATDRI 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RT16_BOVIN (28S ribosomal protein S16, mitochondrial OS=Bos taurus GN=MRPS16 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 443 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+P+P K + LN DR+++W+ GA S PV+++L +G P Sbjct: 19 IRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPMPNSHGEKLVALNLDRIRHWIGCGAHLSKPVEKLLGLSGFFP 98 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |