FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PELUB (30S ribosomal protein S16 OS=Pelagibacter ubique GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 39/82 (47.56%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +++IRL+R G K +P Y+V+ ADSR RDG+ +E +G++NPL +D +R+GL +R+KYWL GAQP+ V RIL G++ Sbjct: 1 MIKIRLSRGGTKKRPVYKVVIADSRRARDGRFIEKVGFFNPLLPKDKKERVGLEAERIKYWLGQGAQPTTRVARILGENGII 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACAC (30S ribosomal protein S16 OS=Lactobacillus acidophilus GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPHL 688 M V+IR+ R G K KPFYR++ ADSR PRDG+ +E +GYYNP+ K + L+ D++ WL GAQPSD V+ +L AGL+ L Sbjct: 1 MSVKIRMHRAGAKRKPFYRIVVADSRMPRDGRFIEQVGYYNPV---SQPKELKLDEDKIFEWLQKGAQPSDTVRSLLSGAGLMAKL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_GLUOX (30S ribosomal protein S16 OS=Gluconobacter oxydans GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 M ++IRLAR G K +P+Y ++ ADSRSPRDG+ +E +G YNP+ D R+ L +R+K+WLS GA +D V R L AGL P Sbjct: 1 MSLKIRLARAGAKKRPYYHIVVADSRSPRDGRFIEKVGSYNPMLPADHADRIRLVDERIKHWLSNGALATDRVARFLGNAGLAP 84
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BLOFL (30S ribosomal protein S16 OS=Blochmannia floridanus GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 41/72 (56.94%), Postives = 54/72 (75.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 +VRIRLAR GCK PFY ++ DSR+ RDG+ +E +G++NP+ D KR+ +N DRV+YWLS GAQPSD V Sbjct: 1 MVRIRLARGGCKKSPFYYIVVTDSRNSRDGRFIERIGFFNPVE-LDIKKRLRVNLDRVRYWLSNGAQPSDRV 71
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_AGRT5 (30S ribosomal protein S16 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpsP PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.004e-16 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y+++ AD+RSPRDG+ LE +G +NP+ +D+ R+ L D +K W++ GAQP+D V R L AGL Sbjct: 1 MALKIRLARGGSKKRPYYQIVVADARSPRDGRFLEKVGSWNPMLAKDNPLRVELKADLIKEWIAKGAQPTDRVLRFLAEAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RT16_MOUSE (28S ribosomal protein S16, mitochondrial OS=Mus musculus GN=Mrps16 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 2 Query: 443 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 IRLA GC N+PFYR++AA ++ PRDG+ +E LG Y+PLP K + LN DR+++W+ GA S P++++L +G P Sbjct: 19 IRLALGGCTNRPFYRIVAAHNKCPRDGRFVEQLGSYDPLPNSHGEKLVALNLDRIRHWIGCGAHLSKPMEKLLGLSGFFP 98
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRTD (30S ribosomal protein S16 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ IL + G++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVEEN---QVTLKEERVLEWLSKGAQPSDTVRNILSKEGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRT2 (30S ribosomal protein S16 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ IL + G++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVEEN---QVTLKEERVLEWLSKGAQPSDTVRNILSKEGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRT1 (30S ribosomal protein S16 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ IL + G++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVEEN---QVTLKEERVLEWLSKGAQPSDTVRNILSKEGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ROSS1 (30S ribosomal protein S16 OS=Roseiflexus sp. (strain RS-1) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 42/82 (51.22%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +V IRL R G +P YR++ ADSR+PRDGK +E++G+YNP+ K + + DRV+YWLSVGAQPS+ V R+L + G+L Sbjct: 1 MVTIRLRRMGKTKQPSYRLVVADSRAPRDGKFIEIVGHYNPV---RQPKELHVKADRVRYWLSVGAQPSETVVRLLKQVGVL 79 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |