FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_METS4 (30S ribosomal protein S16 OS=Methylobacterium sp. (strain 4-46) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRL R G K +P+YR++ ADSRSPRDG+ +E +G Y+P+ +D R+ L ++++ WL+ GAQP+D V R L AGL Sbjct: 1 MSLKIRLTRGGAKKRPYYRIVVADSRSPRDGRFIEKVGVYDPMKPKDDPARVSLESEKIQAWLAKGAQPTDRVLRFLDAAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACH4 (30S ribosomal protein S16 OS=Lactobacillus helveticus (strain DPC 4571) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPHL 688 M V+IR+ R G K KPFYR++ ADSR PRDG+ +E +GYYNP+ K + L+ D++ WL GAQPSD V+ +L AGL+ L Sbjct: 1 MSVKIRMHRAGAKRKPFYRIVVADSRMPRDGRFIEQVGYYNPV---SQPKELKLDEDKIFDWLQKGAQPSDTVRSLLSGAGLMTKL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACCB (30S ribosomal protein S16 OS=Lactobacillus casei (strain BL23) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR++ ADSRSPRDG+ +E +GYYNPL K LN + + WL GAQPSD V+ +L G++ Sbjct: 1 MAVKIRLKRMGSKRKPFYRIVVADSRSPRDGRFIEAVGYYNPLTNPVDLK---LNEEDILNWLQKGAQPSDTVRNLLGSKGIM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACC3 (30S ribosomal protein S16 OS=Lactobacillus casei (strain ATCC 334) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 43/83 (51.81%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR++ ADSRSPRDG+ +E +GYYNPL K LN + + WL GAQPSD V+ +L G++ Sbjct: 1 MAVKIRLKRMGSKRKPFYRIVVADSRSPRDGRFIEAVGYYNPLTNPVDLK---LNEEDILNWLQKGAQPSDTVRNLLGSKGIM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_COPPD (30S ribosomal protein S16 OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=rpsP PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.312e-16 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V++RL R G K +P YRV+ AD RSPRDG+ +E++G+YNP + + + L DRVKYWLSVG +P+D V+ +L +A +L Sbjct: 1 MAVKMRLLRVGAKGQPSYRVVVADERSPRDGRFIEIVGFYNP---RTEPETIQLKEDRVKYWLSVGVKPTDSVRILLRKANML 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICRS (30S ribosomal protein S16 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G Y+P+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYDPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICRO (30S ribosomal protein S16 OS=Rickettsia rickettsii (strain Iowa) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G Y+P+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYDPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICPU (30S ribosomal protein S16 OS=Rickettsia peacockii (strain Rustic) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G Y+P+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYDPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICCN (30S ribosomal protein S16 OS=Rickettsia conorii GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G Y+P+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYDPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICAE (30S ribosomal protein S16 OS=Rickettsia africae (strain ESF-5) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/82 (46.34%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G Y+P+ D+ +R+ L DR++YWL GA+P++ V + + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYDPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGV 82 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |