FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_GEMAT (30S ribosomal protein S16 OS=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K P YR++ ADS++PRDG+ +E+LG Y P G+++ + L DRV +WL+VGA P+D V+ +L RAG+L Sbjct: 1 MAVKIRLRREGRKKTPMYRIVVADSKAPRDGRFIEILGQYQPRGGENA---IALKADRVNHWLNVGALPTDTVRSLLRRAGIL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOD6 (30S ribosomal protein S16 OS=Clostridium difficile (strain 630) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 38/83 (45.78%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G KPFYR++ ADSR+PRDGK +E +GYYNP+ K++ +N ++ WL+ GAQP++ V+++L + G++ Sbjct: 1 MAVKIRLKRMGANKKPFYRIVVADSRAPRDGKFIEEIGYYNPI---SEPKQVRINDEKAIKWLATGAQPTEVVKKLLVKNGVI 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CHLTE (30S ribosomal protein S16 OS=Chlorobium tepidum GN=rpsP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.237e-16 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +V+IRL R G K PFY+++AAD R+PRDGK LEVLG+YNP + + + DRV YWL+VGAQP+D V ++ GLL Sbjct: 1 MVKIRLKRAGRKKMPFYQIVAADGRAPRDGKFLEVLGHYNPTAKPHT---VTIEKDRVAYWLNVGAQPTDTVHSLIRGTGLL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_THERP (30S ribosomal protein S16 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 38/83 (45.78%), Postives = 60/83 (72.29%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 ++++RL R G K +P YR++AA++R PRDG+ +EV+GYYNP + + +N +R ++WL GAQP+D V+ +L RAG+LP Sbjct: 1 MIKLRLRRMGKKRQPHYRIVAAEARWPRDGRFIEVIGYYNP---RTDPYTLEVNVERARWWLEHGAQPTDTVRALLVRAGVLP 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ROSCS (30S ribosomal protein S16 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +V IRL R G KP YR++ ADSR+PRDG+ +E++G+YNP+ K + + DRV+YWL VGAQPS+ V R+L + G+L Sbjct: 1 MVTIRLRRTGKTKKPSYRLVVADSRAPRDGRFIEIVGHYNPV---RQPKELNVKADRVRYWLGVGAQPSETVVRLLKQVGVL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_OCHA4 (30S ribosomal protein S16 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 39/82 (47.56%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y ++ AD RSPRDG+ +E +G +NP+ +D+ +R+ L+ DR+++W++ GAQP+D V R L +AGL Sbjct: 1 MSLKIRLARAGSKKRPYYHIVVADVRSPRDGRFIETVGAWNPMLAKDA-ERVKLDADRIQHWIAQGAQPTDRVLRFLDQAGL 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_METNO (30S ribosomal protein S16 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 38/82 (46.34%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRL R G K +P+YR++ ADSRSPRDG+ ++ +G Y+P+ +D R+ L ++++ WL+ GAQP+D V R L AGL Sbjct: 1 MSLKIRLTRGGAKKRPYYRIVVADSRSPRDGRFIDKVGVYDPMKPKDDPARVSLEAEKIQAWLAKGAQPTDRVLRFLDAAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOBM (30S ribosomal protein S16 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K PFYRV+ ADSRSPRDG+ +E +GYYNP+ + K L+ ++V+ W+ GAQP+D V++++ +AG+ Sbjct: 1 MAVKIRLKRMGAKKAPFYRVVVADSRSPRDGRFVEEIGYYNPITEPSTIK---LDEEKVQKWIKNGAQPTDTVKKLIEKAGI 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOBL (30S ribosomal protein S16 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K PFYRV+ ADSRSPRDG+ +E +GYYNP+ + K L+ ++V+ W+ GAQP+D V++++ +AG+ Sbjct: 1 MAVKIRLKRMGAKKAPFYRVVVADSRSPRDGRFVEEIGYYNPITEPSTIK---LDEEKVQKWIKNGAQPTDTVKKLIEKAGI 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOBK (30S ribosomal protein S16 OS=Clostridium botulinum (strain Okra / Type B1) GN=rpsP PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.922e-16 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K PFYRV+ ADSRSPRDG+ +E +GYYNP+ + K L+ ++V+ W+ GAQP+D V++++ +AG+ Sbjct: 1 MAVKIRLKRMGAKKAPFYRVVVADSRSPRDGRFVEEIGYYNPITEPSTIK---LDEEKVQKWIKNGAQPTDTVKKLIEKAGI 79 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |