FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CHLAD (30S ribosomal protein S16 OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.474e-15 Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 +V+IRL R G +P YR++ ADSRSPRDGK +E +GYY P K + +N DR +YWL VGAQP+D V ++L R +L Sbjct: 1 MVKIRLRRTGKTKQPSYRIVVADSRSPRDGKFIETIGYYLP---TRQPKVLEVNADRARYWLGVGAQPTDVVVKLLKRVNIL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_METEP (30S ribosomal protein S16 OS=Methylobacterium extorquens (strain PA1) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 36/82 (43.90%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRL R G K +P+YR++ AD+R+PRDG+ ++ +G Y+P+ +D R+ L+ ++++ WL+ GAQP+D V R L AGL Sbjct: 1 MSLKIRLTRGGAKKRPYYRIVIADARAPRDGRFIDKVGAYDPMKAKDDPARIVLDNEKIQSWLAKGAQPTDRVLRFLDAAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_METC4 (30S ribosomal protein S16 OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 36/82 (43.90%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRL R G K +P+YR++ AD+R+PRDG+ ++ +G Y+P+ +D R+ L+ ++++ WL+ GAQP+D V R L AGL Sbjct: 1 MSLKIRLTRGGAKKRPYYRIVIADARAPRDGRFIDKVGAYDPMKAKDDPARIVLDNEKIQSWLAKGAQPTDRVLRFLDAAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LARHH (30S ribosomal protein S16 OS=Laribacter hongkongensis (strain HLHK9) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 39/76 (51.32%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G KN+PFY ++ DSR+ RDG+ +E +G+YNP+ + S +R+ LN DR+ YW VGAQ SD V ++L Sbjct: 1 MVVIRLARGGAKNRPFYNIVVTDSRNRRDGRFIERVGFYNPVAAEGS-ERIRLNSDRLAYWTGVGAQVSDAVAKLL 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUSU (30S ribosomal protein S16 OS=Brucella suis GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUO2 (30S ribosomal protein S16 OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUME (30S ribosomal protein S16 OS=Brucella melitensis GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUMB (30S ribosomal protein S16 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUC2 (30S ribosomal protein S16 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUAB (30S ribosomal protein S16 OS=Brucella abortus GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |