FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUA2 (30S ribosomal protein S16 OS=Brucella abortus (strain 2308) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRUA1 (30S ribosomal protein S16 OS=Brucella abortus (strain S19) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/82 (45.12%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD R+PRDG+ +E +G +NP+ +D+ +R+ L+ +R+++W++ GAQP+D V R L +AG+ Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADVRAPRDGRFIETVGSWNPVLPKDA-ERVKLDAERIQHWIAQGAQPTDRVLRFLDQAGI 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BACHD (30S ribosomal protein S16 OS=Bacillus halodurans GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPHL 688 M V+IRL R G K PFYRV+ ADSRSPRDG+ +E +G YNPL ++ L DR W+ GA+PSD V+ + +AGL+ L Sbjct: 1 MAVKIRLKRMGSKKAPFYRVVVADSRSPRDGRFIEEIGTYNPL---TQPAKVELKEDRALDWMLKGAKPSDTVRNLFSKAGLMEKL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ALKOO (30S ribosomal protein S16 OS=Alkaliphilus oremlandii (strain OhILAs) GN=rpsP PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.231e-15 Identity = 37/83 (44.58%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G KPFYR++ AD+RSPRDG+ +E +GYYNP+ K + +N ++ + WL GAQP+D V+ + + G++ Sbjct: 1 MAVKIRLKRMGAHKKPFYRIVVADARSPRDGRFIEEIGYYNPV---SEPKEIKINNEKAEKWLKNGAQPTDTVKDLFKKNGII 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LEUCK (30S ribosomal protein S16 OS=Leuconostoc citreum (strain KM20) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K +PFYRV+ ADSRSPRDG+ +E +G YNP+ + L+ ++ WLS GAQPSD + +L AG+L Sbjct: 1 MSVKIRLKRMGAKKRPFYRVVIADSRSPRDGRFIETVGTYNPIA---QPAEIKLDEAKILTWLSNGAQPSDTARNLLSNAGIL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_EXISA (30S ribosomal protein S16 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 38/83 (45.78%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K PFYR++ ADSRSPRDG+ +E +G+YNP+ ++ R +N + WL+ GA+PSD V+ + +AG++ Sbjct: 1 MAVKIRLKRMGAKKSPFYRIVVADSRSPRDGRFIEQVGHYNPVAKPEAEVR--INEELALKWLADGAKPSDTVRNLFSKAGIM 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_EXIS2 (30S ribosomal protein S16 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G PFYRV+ ADSR+PRDG+ +E +GYYNP+ ++ + LN + WL+ GA+PSD V+ + +AG++ Sbjct: 1 MAVKIRLKRMGANKSPFYRVVVADSRAPRDGRFIEQIGYYNPVAKPEA--EVKLNEELALKWLAEGAKPSDTVRNLFSKAGIM 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLONN (30S ribosomal protein S16 OS=Clostridium novyi (strain NT) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K PFYRV+ ADSRSPRDG+ +E +GYYNP+ K + ++ ++ W+ GAQP+D V+R+ AG+ Sbjct: 1 MAVKIRLRRMGAKKAPFYRVVVADSRSPRDGRFVEEIGYYNPI---SEPKAIKIDEEKAIKWVKNGAQPTDVVKRLFKEAGI 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BEII9 (30S ribosomal protein S16 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15 Identity = 36/77 (46.75%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M ++IRLAR G K +PFYR++ AD+R+PRDG+ +E +G ++PL +++ R+ L+ ++ K WL+ GAQP+D V R+L Sbjct: 1 MSLKIRLARGGAKKRPFYRIVVADARAPRDGRFIERIGTFDPLKAKNAPDRIVLDAEKAKDWLAKGAQPTDRVARLL 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PEDPA (30S ribosomal protein S16 OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=rpsP PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 5.511e-15 Identity = 42/83 (50.60%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K +PFYRV+ ADSRSPRDG+ + +G YNPL S K L + + WL+ GAQPSD V+ I +AG++ Sbjct: 1 MSVKIRLKRMGSKKRPFYRVVVADSRSPRDGRFIAQVGTYNPLTEPASVK---LEEEEILNWLNNGAQPSDTVKNIFSKAGIM 80 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |