FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PARL1 (30S ribosomal protein S16 OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=rpsP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 43/82 (52.44%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +PFYRV+ AD+RSPRDG+ +E +G +NPL +D+ +R+ ++ +R K+WLSVGA P+D V R L AG+ Sbjct: 1 MALKIRLARGGAKKRPFYRVVIADTRSPRDGRFIEKIGTFNPLLPKDNAERIKVDIERAKHWLSVGALPTDRVARFLDDAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MAGSA (30S ribosomal protein S16 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=rpsP PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.401e-18 Identity = 42/83 (50.60%), Postives = 62/83 (74.70%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M ++IRL+R G K +PFY+++ AD+R+PRDG+ +E +G YNP+ D+G+R L+ DRVK+WLSVGAQP+D + R GL+ Sbjct: 1 MALKIRLSRGGAKKRPFYKIVVADARAPRDGRFIEKVGTYNPMLPNDNGQRWILDEDRVKHWLSVGAQPTDRLVRFFADKGLV 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PARDP (30S ribosomal protein S16 OS=Paracoccus denitrificans (strain Pd 1222) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P Y ++A+DSR PRDG+ +E LG YNPL +DS R+ +N +RV+YWL GAQP+D V R L AG+ Sbjct: 1 MAMKIRLARGGSKKRPHYAIVASDSRMPRDGRFIEKLGTYNPLLPKDSEDRIKMNLERVQYWLGQGAQPTDRVARFLEAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_NOVAD (30S ribosomal protein S16 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 42/82 (51.22%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V +RL+R G K +P+Y+++ ++SR+PRDGK+LE +G YNPL +D R+ L DRV+YW+ VGAQP+D V R+L +AG+ Sbjct: 1 MSVSMRLSRGGSKKRPYYKIVVSNSRAPRDGKYLEQVGTYNPLLAKDDENRVRLIEDRVRYWIGVGAQPTDRVARMLDKAGI 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_AGRRK (30S ribosomal protein S16 OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.830e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD+RSPRDG+ LE +G +NP+ +D KR+ L+ DR+K+WL GAQP+D V R L AG+ Sbjct: 1 MALKIRLARGGSKKRPYYHVVIADARSPRDGRFLEKVGSWNPMLAKDDAKRVELDADRIKHWLDNGAQPTDRVLRFLDEAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICBR (30S ribosomal protein S16 OS=Rickettsia bellii (strain RML369-C) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ +DS +R+ L DRV+YWL GA+P+D V R + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVEYWLKSGAKPTDRVARFIEQAGI 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICB8 (30S ribosomal protein S16 OS=Rickettsia bellii (strain OSU 85-389) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ +DS +R+ L DRV+YWL GA+P+D V R + +AG+ Sbjct: 1 MAVKIRLARGGAKKRPFYRVVVANATAPRDGDFLEKVGTYNPMLAKDSNERVVLKADRVEYWLKSGAKPTDRVARFIEQAGI 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHOP2 (30S ribosomal protein S16 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +PFY V+ ADSR PRDG+ +E LGY+NPL +D+ R+ L+ D+VK WL+ GAQPSD V R L G+ Sbjct: 1 MSVVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLMAKDNEARLKLDLDKVKDWLAKGAQPSDRVARFLDITGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHILW (30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+W+ GAQP+D V R L AG+ Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWIENGAQPTDRVLRFLDEAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHIL3 (30S ribosomal protein S16 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.391e-18 Identity = 43/82 (52.44%), Postives = 60/82 (73.17%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD+RSPRDG+ LE LG +NP+ +D KR+ LN +R+K+W+ GAQP+D V R L AG+ Sbjct: 1 MALKIRLARGGSKKRPYYHVVLADARSPRDGRFLENLGSWNPMLAKDDEKRVQLNAERIKHWIEHGAQPTDRVLRFLDEAGV 82 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |