FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACSS (30S ribosomal protein S16 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 39/83 (46.99%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IR+ R G K +PFYR++ ADSRSPRDG+ ++ +GYYNPL K L + + WL GAQPSD V+ +L + G++ Sbjct: 1 MSVKIRMKRMGSKKRPFYRIVVADSRSPRDGRFIQQVGYYNPLTEPVDLK---LEEEVIMDWLQKGAQPSDTVRNLLSKQGIM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACBA (30S ribosomal protein S16 OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K +PFYRV+ ADSRSPRDG+ +E +G YNP+ ++ L + + WL+ GAQPSD V+ +L AG++ Sbjct: 1 MSVKIRLKRMGSKKRPFYRVVVADSRSPRDGRFIEQVGTYNPV---TEPAQVTLKEESILNWLNNGAQPSDTVKTLLSNAGIM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOPS (30S ribosomal protein S16 OS=Clostridium perfringens (strain SM101 / Type A) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G PFYRV+ ADSRSPRDG+ +E +GYYNP+ ++ + ++ ++ WL GAQP+D V+++ +AG+ Sbjct: 1 MAVKIRLRRMGAHKAPFYRVVVADSRSPRDGRFIEEIGYYNPIAKPEA--EVKIDAEKAAKWLGNGAQPTDIVKKLFNQAGI 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOPE (30S ribosomal protein S16 OS=Clostridium perfringens GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G PFYRV+ ADSRSPRDG+ +E +GYYNP+ ++ + ++ ++ WL GAQP+D V+++ +AG+ Sbjct: 1 MAVKIRLRRMGAHKAPFYRVVVADSRSPRDGRFIEEIGYYNPIAKPEA--EVKIDAEKAAKWLGNGAQPTDIVKKLFNQAGI 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_CLOP1 (30S ribosomal protein S16 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 37/82 (45.12%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G PFYRV+ ADSRSPRDG+ +E +GYYNP+ ++ + ++ ++ WL GAQP+D V+++ +AG+ Sbjct: 1 MAVKIRLRRMGAHKAPFYRVVVADSRSPRDGRFIEEIGYYNPIAKPEA--EVKIDAEKAAKWLGNGAQPTDIVKKLFNQAGI 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BACFR (30S ribosomal protein S16 OS=Bacteroides fragilis GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAG--LLPHLL 691 M RIRL R G K+ FY ++ ADSR+PRDGK E +G YNP + + LNF+R +W+ VGAQPSD V+ IL R G + HLL Sbjct: 1 MATRIRLQRHGRKSYAFYSIVIADSRAPRDGKFTEKIGTYNP---NTNPATVDLNFERALHWVLVGAQPSDTVRNILSREGVYMKKHLL 86
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BACFN (30S ribosomal protein S16 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 44/89 (49.44%), Postives = 56/89 (62.92%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAG--LLPHLL 691 M RIRL R G K+ FY ++ ADSR+PRDGK E +G YNP + + LNF+R +W+ VGAQPSD V+ IL R G + HLL Sbjct: 1 MATRIRLQRHGRKSYAFYSIVIADSRAPRDGKFTEKIGTYNP---NTNPATVDLNFERALHWVLVGAQPSDTVRNILSREGVYMKKHLL 86
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ANOFW (30S ribosomal protein S16 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 39/83 (46.99%), Postives = 53/83 (63.86%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K PFYR++ ADSRSPRDG+ +E +G YNPL + +N + WL GA+PSD V+ +L + G+L Sbjct: 1 MAVKIRLKRMGAKKSPFYRIVVADSRSPRDGRFIETIGTYNPL---TEPAEIKINEELALKWLQNGAKPSDTVRNLLSKQGIL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ALKMQ (30S ribosomal protein S16 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rpsP PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.228e-14 Identity = 35/83 (42.17%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K +PFYR++ AD+R+PRDG+ +E +GYYNP+ K + ++ ++ + WL GAQP+D V+ + + G++ Sbjct: 1 MAVKIRLKRMGAKKRPFYRIVVADARAPRDGRFIEEIGYYNPV---SEPKEIKIDGEKAEKWLGNGAQPTDTVKYLFKKNGII 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACRJ (30S ribosomal protein S16 OS=Lactobacillus reuteri (strain JCM 1112) GN=rpsP PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.603e-14 Identity = 40/83 (48.19%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K +PFYR++ ADSR+PRDG+ + +G YNPL + K + + D V WL GAQPSD V+ +L AG++ Sbjct: 1 MSVKIRLKRMGSKKRPFYRIVVADSRAPRDGRFITSVGTYNPL---TTPKEVKFDEDAVMEWLQKGAQPSDTVRNMLQAAGVM 80 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |