FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHILO (30S ribosomal protein S16 OS=Rhizobium loti GN=rpsP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M ++IRLAR G K +P+Y V+ AD+RSPRDG+ +E LG +NPL +D G+R+ ++ DRVK+WLS GAQP+D V R L AGL Sbjct: 1 MALKIRLARAGSKKRPYYHVVVADARSPRDGRFIESLGSWNPLLPKD-GERVKVDADRVKHWLSHGAQPTDRVLRFLDEAGL 81
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_NITWN (30S ribosomal protein S16 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsP PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.122e-18 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +P Y V+AADSR PRDG+ +E LG++NPL +D+ R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 1 MPVVIRLARAGTKKRPVYHVVAADSRYPRDGRFIERLGHFNPLMPKDNADRLKLDLDKVKAWLAKGAQPSDRVARFLDAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_OLICO (30S ribosomal protein S16 OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D+ R+ L+ D+VK WL+ GAQPSD V R L AG+ Sbjct: 1 MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLLPKDNEARLKLDMDKVKAWLAKGAQPSDRVMRFLDAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_NITHX (30S ribosomal protein S16 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D+ R+ ++ D+VK WL+ GAQPSD V R L AG+ Sbjct: 1 MPVVIRLARAGTKKRPVYHVVVADSRYPRDGRFIERLGYFNPLMPKDNADRLKIDLDKVKAWLAKGAQPSDRVARFLDAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_AZOC5 (30S ribosomal protein S16 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 42/83 (50.60%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M ++IRLAR G K +P+YR++ AD+RSPRDG+ +E +G +NPL +D+ +R+ L+ ++ K WL GAQP+D V R L AGLL Sbjct: 1 MSLKIRLARGGAKKRPYYRIVVADARSPRDGRFIEKIGTFNPLLAKDAAERVTLDTEKAKAWLEKGAQPTDRVARFLDAAGLL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACICJ (30S ribosomal protein S16 OS=Acidiphilium cryptum (strain JF-5) GN=rpsP PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.078e-18 Identity = 45/84 (53.57%), Postives = 58/84 (69.05%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLP 682 M ++IRLAR G K +PFY ++ ADSRSPRDGK +E +G YNP+ D R+ L DRV +WLS GAQ +D V R + +AGL P Sbjct: 1 MSLKIRLARAGAKKRPFYHIVVADSRSPRDGKFIERIGTYNPMLPADHEDRIRLVTDRVTHWLSQGAQATDRVARFIGKAGLAP 84
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_THETN (30S ribosomal protein S16 OS=Thermoanaerobacter tengcongensis GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M VRIRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIA---EPAEIKIDVEKAKKWLSVGAQPSDTVKSLFRKEGII 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_THEPX (30S ribosomal protein S16 OS=Thermoanaerobacter sp. (strain X514) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M VRIRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIA---QPAEIKIDVEKAKKWLSVGAQPSDTVKSLFKKEGII 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_THEP3 (30S ribosomal protein S16 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.955e-18 Identity = 41/83 (49.40%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M VRIRL RFG K +PFYR++ ADSRSPRDG+ ++ +GYYNP+ + ++ ++ K WLSVGAQPSD V+ + + G++ Sbjct: 1 MAVRIRLKRFGAKKRPFYRIVVADSRSPRDGRFIDEIGYYNPIA---QPAEIKIDVEKAKKWLSVGAQPSDTVKSLFKKEGII 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANP2 (30S ribosomal protein S16 OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=rpsP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.084e-18 Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M ++IRLAR G K +P+YR++ AD+RSPRDG+ +E +G +NPL +D+ R+ L+ D+ K WL GAQP+D V R L AGL+ Sbjct: 1 MSLKIRLARGGAKKRPYYRIVIADARSPRDGRFIEKIGTFNPLLAKDAENRVVLDADKAKAWLEKGAQPTDRVARFLDAAGLM 83 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |