FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEU2 (30S ribosomal protein S16 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 ++ IRLA G K +PFY + DSR+ RDG H E +G++NP+ GQ+ R+ +N +RV YWLSVGAQ S+ V ++L Sbjct: 1 MLTIRLALGGSKKRPFYHLTVTDSRNARDGSHKEQVGFFNPVARGQEI--RLSVNEERVNYWLSVGAQTSERVAQLL 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSE14 (30S ribosomal protein S16 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 ++ IRLA G K +PFY + DSR+ RDG H E +G++NP+ GQ+ R+ +N +RV YWLSVGAQ S+ V ++L Sbjct: 1 MLTIRLALGGSKKRPFYHLTVTDSRNARDGSHKEQVGFFNPVARGQEI--RLSVNEERVNYWLSVGAQTSERVAQLL 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_POLSJ (30S ribosomal protein S16 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 36/77 (46.75%), Postives = 54/77 (70.13%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K++PF+ ++ AD R RDG+ +E +G+YNP+ G + G R+ DR+ +WL VGAQPS V+R++ Sbjct: 1 MVVIRLARGGSKHRPFFNIVVADKRVRRDGRFIERIGFYNPIAKGGEEGLRIAQ--DRLTHWLGVGAQPSPTVERLV 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MYCSK (30S ribosomal protein S16 OS=Mycobacterium sp. (strain KMS) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M V+I+L R G P YR++ AD+R+ RDG+ +EV+G Y+P ++ + LN +R +YWL VGAQP++PV ++L Sbjct: 1 MAVKIKLTRLGKIRNPQYRIVVADARTRRDGRSIEVIGRYHP---KEEPSLIELNSERAQYWLGVGAQPTEPVLQLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MYCSJ (30S ribosomal protein S16 OS=Mycobacterium sp. (strain JLS) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 34/77 (44.16%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M V+I+L R G P YR++ AD+R+ RDG+ +EV+G Y+P ++ + LN +R +YWL VGAQP++PV ++L Sbjct: 1 MAVKIKLTRLGKIRNPQYRIVVADARTRRDGRSIEVIGRYHP---KEEPSLIELNSERAQYWLGVGAQPTEPVLQLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MYCPA (30S ribosomal protein S16 OS=Mycobacterium paratuberculosis GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M V+I+L R G P YR+ AD+R+ RDG+ +E++G Y+P ++ + +N +R +YWLSVGAQP++PV ++L Sbjct: 1 MAVKIKLTRLGKIRNPQYRIAVADARTRRDGRSIEIIGRYHP---KEDPSLIEINSERAQYWLSVGAQPTEPVLKLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MYCA1 (30S ribosomal protein S16 OS=Mycobacterium avium (strain 104) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 33/77 (42.86%), Postives = 53/77 (68.83%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M V+I+L R G P YR+ AD+R+ RDG+ +E++G Y+P ++ + +N +R +YWLSVGAQP++PV ++L Sbjct: 1 MAVKIKLTRLGKIRNPQYRIAVADARTRRDGRSIEIIGRYHP---KEDPSLIEINSERAQYWLSVGAQPTEPVLKLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_DESDA (30S ribosomal protein S16 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M V+++L R G K PFYRV+AA + RDG+ LE LGYYNP+ K L+ D++K WL+ GA+P+D V+ ++ Sbjct: 1 MAVKLKLTRLGSKKHPFYRVVAATDETRRDGRPLEFLGYYNPMTDPVEVK---LDADKIKEWLARGAEPTDTVRALI 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BUCAT (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain Tuc7) GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 31/76 (40.79%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V+IRLAR+G K +PFY+++ ADSR R+G+ +E LGY+NP+ + + + LN +R+++W + GAQ S+ ++++ Sbjct: 1 MVKIRLARYGTKKRPFYKLVVADSRFSRNGRFIERLGYFNPI-AKGKSEILKLNLERIEHWTNQGAQMSERTKKLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BUCAI (30S ribosomal protein S16 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=rpsP PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.501e-12 Identity = 31/76 (40.79%), Postives = 56/76 (73.68%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V+IRLAR+G K +PFY+++ ADSR R+G+ +E LGY+NP+ + + + LN +R+++W + GAQ S+ ++++ Sbjct: 1 MVKIRLARYGTKKRPFYKLVVADSRFSRNGRFIERLGYFNPI-AKGKSEILKLNLERIEHWTNQGAQMSERTKKLI 75 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |