FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BORBZ (30S ribosomal protein S16 OS=Borrelia burgdorferi (strain ZS7) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K +P+YRV+ +S SPRDG+ +E LGYY+P+ Q+ K + DR+K W+S GA SD V+ +L + L Sbjct: 1 MSVKIRLKRMGAKKRPYYRVVVMNSTSPRDGRAIEELGYYHPVEKQNQIK---IKEDRMKDWISKGAILSDTVKMLLNKNNL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BORBU (30S ribosomal protein S16 OS=Borrelia burgdorferi GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 38/82 (46.34%), Postives = 54/82 (65.85%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRL R G K +P+YRV+ +S SPRDG+ +E LGYY+P+ Q+ K + DR+K W+S GA SD V+ +L + L Sbjct: 1 MSVKIRLKRMGAKKRPYYRVVVMNSTSPRDGRAIEELGYYHPVEKQNQIK---IKEDRMKDWISKGAILSDTVKMLLNKNNL 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIBY (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain AYE) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIBT (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIBS (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain SDF) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIBC (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain ACICU) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIB5 (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain AB0057) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIB3 (30S ribosomal protein S16 OS=Acinetobacter baumannii (strain AB307-0294) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIAD (30S ribosomal protein S16 OS=Acinetobacter sp. (strain ADP1) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12 Identity = 34/79 (43.04%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+++ DSR+ RDG+ +E +G++NP Q +++ L+ DR +W+S GAQPS+ V + +A Sbjct: 1 MVVIRLARGGAKKRPFYQIVVTDSRNARDGRFIERIGFFNP-TAQGQAEKLRLDADRFAHWVSQGAQPSERVASLAAQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_SHEFN (30S ribosomal protein S16 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 35/77 (45.45%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NPL GQ+ R L+ DRV++W++ GA S+ V +++ Sbjct: 1 MVTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPLARGQEETLR--LDLDRVEHWVATGAATSERVAKLI 75 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |