FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEPW (30S ribosomal protein S16 OS=Pseudomonas putida (strain W619) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 34/76 (44.74%), Postives = 53/76 (69.74%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY + +SR+ RDG+ +E +G++NP+ + ++ +N +RV YWLS GAQPS+ V ++L Sbjct: 1 MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPI-AAGAEVKLSVNQERVSYWLSQGAQPSERVAQLL 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEPK (30S ribosomal protein S16 OS=Pseudomonas putida (strain KT2440) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY + +SR+ RDG+ +E +G++NP+ + ++ +N +RV YWLS GAQPS+ V ++L A Sbjct: 1 MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPI-AAGAEVKLSVNQERVTYWLSQGAQPSERVAQLLKEA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEPG (30S ribosomal protein S16 OS=Pseudomonas putida (strain GB-1) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY + +SR+ RDG+ +E +G++NP+ + ++ +N +RV YWLS GAQPS+ V ++L A Sbjct: 1 MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPI-AAGAEVKLSVNQERVTYWLSQGAQPSERVAQLLKEA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEP1 (30S ribosomal protein S16 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY + +SR+ RDG+ +E +G++NP+ + ++ +N +RV YWLS GAQPS+ V ++L A Sbjct: 1 MVTIRLARGGSKKRPFYHLTVTNSRNARDGRFVERVGFFNPI-AAGAEVKLSVNQERVTYWLSQGAQPSERVAQLLKEA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_DEIRA (30S ribosomal protein S16 OS=Deinococcus radiodurans GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 33/81 (40.74%), Postives = 55/81 (67.90%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 +V+IRL+RFG + P YR++ AD R PRDG ++E LG+Y+ P + S + ++ +R +W++ GAQP+D +R+L G+ Sbjct: 1 MVKIRLSRFGSAHNPHYRIVVADVRRPRDGGYIESLGHYD--PRKTSENFLKIDVERANHWIAQGAQPTDTARRLLRSQGV 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_COXBU (30S ribosomal protein S16 OS=Coxiella burnetii GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K PFY ++ AD R PRDG+ +E +GYYNP+ GQD R+ L +R+ +WL+ GAQ S V+ ++ Sbjct: 1 MVVIRLARGGSKKNPFYHIVVADRRKPRDGRFIERVGYYNPMARGQDI--RLQLEKERISHWLNQGAQTSLRVKHLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_COXBR (30S ribosomal protein S16 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K PFY ++ AD R PRDG+ +E +GYYNP+ GQD R+ L +R+ +WL+ GAQ S V+ ++ Sbjct: 1 MVVIRLARGGSKKNPFYHIVVADRRKPRDGRFIERVGYYNPMARGQDI--RLQLEKERISHWLNQGAQTSLRVKHLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_COXBN (30S ribosomal protein S16 OS=Coxiella burnetii (strain Dugway 5J108-111) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K PFY ++ AD R PRDG+ +E +GYYNP+ GQD R+ L +R+ +WL+ GAQ S V+ ++ Sbjct: 1 MVVIRLARGGSKKNPFYHIVVADRRKPRDGRFIERVGYYNPMARGQDI--RLQLEKERISHWLNQGAQTSLRVKHLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BURXL (30S ribosomal protein S16 OS=Burkholderia xenovorans (strain LB400) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY ++A DSR+ RDG+ +E +G+YNP+ G+ + + DR+ YW VGAQ S V+R++ A Sbjct: 1 MVIIRLARGGSKKRPFYNIVATDSRNRRDGRFIERVGFYNPV--ATKGESLRIAQDRLTYWQGVGAQLSPTVERLVKEA 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BURPP (30S ribosomal protein S16 OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=rpsP PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.560e-12 Identity = 36/79 (45.57%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY ++A DSR+ RDG+ +E +G+YNP+ G+ + + DR+ YW VGAQ S V+R++ A Sbjct: 1 MVIIRLARGGSKKRPFYNIVATDSRNRRDGRFIERVGFYNPV--ATKGESLRIAQDRLTYWQGVGAQLSPTVERLVKEA 77 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |