FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PSEA6 (30S ribosomal protein S16 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRL R G K +PFY+V+ ADSR RDG+ +E +G++NP Q +R+ L+ DRV++W+ GA SD V R++ Sbjct: 1 MVTIRLQRGGAKKRPFYQVVVADSRRSRDGRFIENIGFFNP-TAQGQEERLRLDLDRVEHWVGNGAGLSDRVARLV 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_HERAR (30S ribosomal protein S16 OS=Herminiimonas arsenicoxydans GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPL-PGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAG 673 +V IRLAR G K +PF+ ++A DSR+ RDG+ +E +G+YNP+ G + R+ DR+ YW VGAQ S V R++ +AG Sbjct: 1 MVVIRLARGGAKKRPFFNIVATDSRNRRDGRFIERIGFYNPVASGAEESVRIAQ--DRLAYWQGVGAQLSPTVARLVAQAG 79
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_EDWI9 (30S ribosomal protein S16 OS=Edwardsiella ictaluri (strain 93-146) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 35/79 (44.30%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PFY+V+ DSR+ RDG+ +E +G++NP+ S + + L+ DRV +W+S GA SD V ++ A Sbjct: 1 MVTIRLARGGAKKRPFYQVVVTDSRNARDGRFIERVGFFNPI-ATGSAEGLRLDLDRVSHWVSQGATVSDRVAALIKEA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BIFLI (30S ribosomal protein S16 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/77 (48.05%), Postives = 47/77 (61.04%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 M +IRL R G K FYRV+ DSR RDGK +E +G YNP + + DR +YWL VGAQPS+PV ++L Sbjct: 1 MATKIRLKRQGKKFYAFYRVVVVDSRKKRDGKVIEEIGIYNP---NTQPSTIQIKSDRAQYWLGVGAQPSEPVFKLL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ANASK (30S ribosomal protein S16 OS=Anaeromyxobacter sp. (strain K) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 M V +RL+R G PFY V+A DSR+ RDGK+LE +G Y+P + R+ L +R+++WL GA+PS V IL RA Sbjct: 1 MAVVLRLSRAGTHKAPFYHVVATDSRNARDGKYLEDVGIYDPTKRPE---RIELKVERIEHWLKAGAKPSQTVAMILKRA 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ANADF (30S ribosomal protein S16 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 M V +RL+R G PFY V+A DSR+ RDGK++E +G Y+P +R+ L +R+++WL VGA PS V IL RA Sbjct: 1 MAVVLRLSRAGTHKAPFYHVVATDSRNARDGKYIEDVGIYDP---TQQPERIELKAERIEHWLKVGATPSQTVAMILKRA 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ANADE (30S ribosomal protein S16 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 M V +RL+R G PFY V+A DSR+ RDGK+LE +G Y+P + R+ L +R+++WL GA+PS V IL RA Sbjct: 1 MAVVLRLSRAGTHKAPFYHVVATDSRNARDGKYLEDVGIYDPTKRPE---RIELKVERIEHWLKAGAKPSQTVAMILKRA 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ANAD2 (30S ribosomal protein S16 OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 M V +RL+R G PFY V+A DSR+ RDGK+LE +G Y+P + R+ L +R+++WL GA+PS V IL RA Sbjct: 1 MAVVLRLSRAGTHKAPFYHVVATDSRNARDGKYLEDVGIYDPTKRPE---RIELKVERIEHWLKAGAKPSQTVAMILKRA 77
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ACIAC (30S ribosomal protein S16 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.367e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRL+R G K +PF+ ++ AD R RDG+ +E LG+YNP ++ + + + DR+ YW SVGAQ SD V+R++ +A Sbjct: 1 MVVIRLSRGGSKGRPFFNIVVADKRVRRDGRFIERLGFYNP-TAKEGEEGLRIAQDRLTYWKSVGAQVSDTVERLIKQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANCP (30S ribosomal protein S16 OS=Xanthomonas campestris pv. campestris GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRI 658 +V+IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q + R+ L+ RV +W+ GAQ +D V+ + Sbjct: 1 MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRVVLDVARVDHWVGQGAQLTDKVRNL 74 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |