FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANCB (30S ribosomal protein S16 OS=Xanthomonas campestris pv. campestris (strain B100) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRI 658 +V+IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q + R+ L+ RV +W+ GAQ +D V+ + Sbjct: 1 MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRVVLDVARVDHWVGQGAQLTDKVRNL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_XANC8 (30S ribosomal protein S16 OS=Xanthomonas campestris pv. campestris (strain 8004) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/75 (45.33%), Postives = 51/75 (68.00%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRI 658 +V+IRL R G K +PFY ++ D RS RDG+++E LGYYNP+ Q + R+ L+ RV +W+ GAQ +D V+ + Sbjct: 1 MVKIRLTRGGAKKRPFYHIIVTDVRSARDGRNIERLGYYNPV-AQGAEPRVVLDVARVDHWVGQGAQLTDKVRNL 74
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_SHEPA (30S ribosomal protein S16 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/77 (44.16%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NP+ GQ+ R L+ DRV++W++ GA +D V +++ Sbjct: 1 MVTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPVARGQEEALR--LDLDRVEHWVANGAATTDRVAKLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_SHEHH (30S ribosomal protein S16 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 34/77 (44.16%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY ++ ADSR+ RDG+ +E +G++NP+ GQ+ R L+ DRV++W++ GA +D V +++ Sbjct: 1 MVTIRLARGGAKKRPFYNIVVADSRNARDGRFIERVGFFNPVARGQEEALR--LDLDRVEHWVANGAATTDRVAKLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RHOFD (30S ribosomal protein S16 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 35/79 (44.30%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 +V IRLAR G K +PF+ ++ AD R+ RDG+ +E LG+YNP+ + + + + DR+ YW SVGAQ S V+R++ +A Sbjct: 1 MVVIRLARGGAKARPFFNIVVADKRTRRDGRFIERLGFYNPIATANE-ESIRIAQDRLTYWRSVGAQASPTVERLISQA 78
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_PECCP (30S ribosomal protein S16 OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY+V+ DSR+ RDG+ +E +G++NP+ + + L+ DR+++WL +GA SD V ++ Sbjct: 1 MVTIRLARGGAKKRPFYQVVVTDSRNARDGRFIERVGFFNPI-AAGQAEALRLDLDRIEHWLGLGATVSDRVSSLI 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_MARMS (30S ribosomal protein S16 OS=Marinomonas sp. (strain MWYL1) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 35/77 (45.45%), Postives = 55/77 (71.43%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRL+R G K +PFY + ADSR RDG+++E LG++NP+ GQ+ +R+ ++ DRV +W+S GAQ SD +++ Sbjct: 1 MVTIRLSRGGSKKRPFYHLNVADSRRARDGRYIERLGFFNPVARGQE--ERLRIDLDRVNHWVSQGAQLSDRAAQLV 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_IDILO (30S ribosomal protein S16 OS=Idiomarina loihiensis GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 33/77 (42.86%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLP-GQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRL R G K +PFY+++ ADSR+ RDG+ +E +G++NP+ GQ+ +++ ++ DR+++W+S GAQ SD V +++ Sbjct: 1 MVTIRLQRGGAKKRPFYQMVVADSRNARDGRFIEKVGFFNPVARGQE--EKLRVDVDRIEHWVSKGAQLSDRVAKLV 75
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_HELPH (30S ribosomal protein S16 OS=Helicobacter pylori (strain HPAG1) GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 2 Query: 443 IRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRA 670 IRL R G K KPFYRV+ DSR RDG +E +GYYNPL K + ++ +R+ YW SVGA+ S+ V+++ +A Sbjct: 4 IRLTRIGRKKKPFYRVVVTDSRKRRDGGWIESIGYYNPL---SEPKDIKIDKERLNYWKSVGAKMSERVEKLSQKA 76
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_ERWCT (30S ribosomal protein S16 OS=Erwinia carotovora subsp. atroseptica GN=rpsP PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.703e-12 Identity = 32/76 (42.11%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 434 VVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRIL 661 +V IRLAR G K +PFY+V+ DSR+ RDG+ +E +G++NP+ + + L+ DR+++WL +GA SD V ++ Sbjct: 1 MVTIRLARGGAKKRPFYQVVVTDSRNARDGRFIERVGFFNPI-ATGQAEALRLDLDRIEHWLGLGATVSDRVSSLI 75 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |