FC931767
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_BRAJA (30S ribosomal protein S16 OS=Bradyrhizobium japonicum GN=rpsP PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.643e-17 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V IRLAR G K +P Y V+ ADSR PRDG+ +E LGY+NPL +D+ R+ L+ ++VK W++ GAQPSD V R L AG+ Sbjct: 1 MSVVIRLARAGTKKRPVYHVVVADSRFPRDGRFIERLGYFNPLLPKDNEARLKLDMEKVKAWVAKGAQPSDRVSRFLDAAGV 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_WOLPP (30S ribosomal protein S16 OS=Wolbachia pipientis subsp. Culex pipiens (strain wPip) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYR++ ADSR+PRDG+ +E +G Y+P+ +D+ R+ + DR+K+WLSVGAQ ++ V Sbjct: 1 MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIERIGQYDPMLPKDNKNRVVVKADRLKHWLSVGAQATERV 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRSV (30S ribosomal protein S16 OS=Streptococcus sanguinis (strain SK36) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSRSPRDG+ +E +G YNPL ++ ++ L DR+ WL GAQPSD V+ IL + G+L Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRSPRDGRFIETVGTYNPLVAEN---QVTLKEDRILEWLGNGAQPSDTVRNILSKEGVL 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_RICAH (30S ribosomal protein S16 OS=Rickettsia akari (strain Hartford) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 40/82 (48.78%), Postives = 59/82 (71.95%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGL 676 M V+IRLAR G K +PFYRV+ A++ +PRDG LE +G YNP+ D+ +R+ L DR++YWL GA+P++ V + + +AGL Sbjct: 1 MAVKIRLARGGAKKRPFYRVVIANAAAPRDGDFLEKVGTYNPMLASDNSERVVLKKDRIEYWLGTGAKPTERVAKFIEQAGL 82
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_METSB (30S ribosomal protein S16 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 41/83 (49.40%), Postives = 61/83 (73.49%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M ++IRL+R G K +PFYRV+ ADSR PRDG+ +E LG ++PL +DS +R+ L+ ++ K W++ GAQP+D V R+L G+L Sbjct: 1 MPLKIRLSRGGAKKRPFYRVVVADSRMPRDGRFIERLGVFDPLKAKDSAERVVLDAEKAKEWIAKGAQPTDRVARLLDGLGVL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACLA (30S ribosomal protein S16 OS=Lactococcus lactis subsp. lactis GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDGK +E +G YNPL ++ ++ L +RV WLS GAQPSD V+ +L +AG++ Sbjct: 1 MSVKIRLTRMGSKKKPFYRINVADSRAPRDGKFIETVGTYNPLVTEE---QVTLKEERVLEWLSKGAQPSDTVRNLLSKAGVM 80
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACDB (30S ribosomal protein S16 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPHL 688 M V+IR+ R G K KPFYR++ ADSR+PRDG+ +E +GYYNP+ K + L+ D++ WL GAQPSD V+ L AGL+ L Sbjct: 1 MSVKIRMRRMGAKRKPFYRIVVADSRAPRDGRFIEEVGYYNPV---SQPKELKLDEDKIFEWLKKGAQPSDTVRSFLSSAGLMAKL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_LACDA (30S ribosomal protein S16 OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.452e-17 Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLLPHL 688 M V+IR+ R G K KPFYR++ ADSR+PRDG+ +E +GYYNP+ K + L+ D++ WL GAQPSD V+ L AGL+ L Sbjct: 1 MSVKIRMRRMGAKRKPFYRIVVADSRAPRDGRFIEEVGYYNPV---SQPKELKLDEDKIFEWLKKGAQPSDTVRSFLSSAGLMAKL 83
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_WOLTR (30S ribosomal protein S16 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 39/73 (53.42%), Postives = 56/73 (76.71%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPV 649 M V+IRLARFG K +PFYR++ ADSR+PRDG+ +E +G Y+P+ +D+ + + DR+KYWL+VGAQ S+ V Sbjct: 1 MAVKIRLARFGAKKRPFYRIVVADSRAPRDGRFIERIGQYDPMLSKDNKNCVVVKADRLKYWLNVGAQASERV 73
BLAST of FC931767 vs. ExPASy Swiss-Prot
Match: RS16_STRMU (30S ribosomal protein S16 OS=Streptococcus mutans GN=rpsP PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 431 MVVRIRLARFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDSGKRMGLNFDRVKYWLSVGAQPSDPVQRILFRAGLL 679 M V+IRL R G K KPFYR+ ADSR+PRDG+ +E +G YNPL ++ ++ L DR+ WL GAQPSD V+ IL +AG++ Sbjct: 1 MAVKIRLTRMGSKKKPFYRINVADSRAPRDGRFIETVGTYNPLVTEN---QVTLKEDRILEWLGNGAQPSDTVRNILSKAGIM 80 The following BLAST results are available for this feature:
BLAST of FC931767 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931767 ID=FC931767; Name=FC931767; organism=Citrus clementina; type=EST; length=692bpback to top |