FC931789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: YVN1_AZOVI (UPF0076 protein in vnfA 5'region OS=Azotobacter vinelandii PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.039e-20 Identity = 51/124 (41.13%), Postives = 76/124 (61.29%), Query Frame = 2 Query: 239 KEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIVAL 610 K + T+KAPAA+G YSQAI+A + ++SG + L P T + V E QT +V +N+ +++A+G ++ +VK I L DL F NE +YF P PARA A+LP A+VE++ I+ L Sbjct: 3 KSVINTDKAPAAIGTYSQAIRAGDTVYLSGQIPLDPGTMELVEGDFEAQTVRVFENLKAVVEAAGGSFADIVKLNIFLTDLAHFANGNECMGRYFAQPYPARAAIACASLPRGAQVEMDGILVL 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: TDCF_SHIFL (Protein tdcF OS=Shigella flexneri GN=tdcF PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 46/125 (36.80%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECI 601 +K+ + T +AP A+GPY Q + ++ F SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE I Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAI 124
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: TDCF_ECOLI (Protein tdcF OS=Escherichia coli (strain K12) GN=tdcF PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 46/125 (36.80%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECI 601 +K+ + T +AP A+GPY Q + ++ F SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE I Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAI 124
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: TDCF_ECOL6 (Protein tdcF OS=Escherichia coli O6 GN=tdcF PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.933e-20 Identity = 46/125 (36.80%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYF---PSPAPARATYQVAALPLDARVEIECI 601 +K+ + T +AP A+GPY Q + ++ F SG + + P+TG+ +D ++DQ L+N+ I+ A+G ++K T+ + DL DF T+NE+Y ++F + P R+ QVA LP D ++EIE I Sbjct: 1 MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPAD-VQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATYPTRSCVQVARLPKDVKLEIEAI 124
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: MMF1_YEAST (Protein MMF1, mitochondrial OS=Saccharomyces cerevisiae GN=MMF1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 51/123 (41.46%), Postives = 74/123 (60.16%), Query Frame = 2 Query: 248 VVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIVALPN 616 V T AP A YSQA+KANN +VSG + P+ K V +I ++ EQV +N+ IL S + ++VK + LAD+K+F N +YAK+F + PAR+ VA+LPL+ +E+E I N Sbjct: 24 VSTKLAPPAAASYSQAMKANNFVYVSGQIPYTPDN-KPVQGSISEKAEQVFQNVKNILAESNSSLDNIVKVNVFLADMKNFAEFNSVYAKHFHTHKPARSCVGVASLPLNVDLEMEVIAVEKN 145
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: MMF1_SCHPO (Protein mmf1, mitochondrial OS=Schizosaccharomyces pombe GN=mmf1 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.945e-19 Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 269 AALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLD---ARVEIECI 601 ++ GPY+QAIKAN + + SG + + GK + T+ DQT Q L N+ E+L +G+ + +VK I LAD+ DF VN++Y + P P PAR+ V +PL ++EIECI Sbjct: 48 SSAGPYNQAIKANGVIYCSGQIPVA--NGKVIEGTVGDQTRQCLLNLQEVLTEAGSSLNKIVKVNIFLADMDDFAAVNKVYTEVLPDPKPARSCVAVKTVPLSTQGVKIEIECI 159
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: MMF2_SCHPO (Protein mmf2, mitochondrial OS=Schizosaccharomyces pombe GN=mmf2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.023e-19 Identity = 45/113 (39.82%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 278 GPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDA---RVEIECIVA 607 GPY+QA+K+ L F SG + + G FV TI++QT ++N+ E+L+ +G+ +VK I L D+ DF +NE+Y + P P PAR T +PL + ++EIECI A Sbjct: 15 GPYNQAVKSGGLIFCSGQAAV--KDGNFVPGTIQEQTRLTIENLAEVLRVAGSSLEKLVKVNIFLTDIDDFAAMNEVYKEMLPDPMPARTTVAAGKIPLSSKGGKIEIECIAA 125
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: YJGF_SHIFL (UPF0076 protein yjgF OS=Shigella flexneri GN=yjgF PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECI 601 + + + T APAA+GPY Q + N+ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE I Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAI 124
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: YJGF_ECOLI (UPF0076 protein yjgF OS=Escherichia coli (strain K12) GN=yjgF PE=1 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECI 601 + + + T APAA+GPY Q + N+ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE I Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAI 124
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: YJGF_ECOL6 (UPF0076 protein yjgF OS=Escherichia coli O6 GN=yjgF PE=3 SV=2) HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18 Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFP---SPAPARATYQVAALPLDARVEIECI 601 + + + T APAA+GPY Q + N+ SG + + P+TG+ +D + Q Q L N+ I++A+G +VKTT+ + DL DF TVN Y +F + PAR+ +VA LP D ++EIE I Sbjct: 1 MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPAD-VAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAI 124 The following BLAST results are available for this feature:
BLAST of FC931789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931789 ID=FC931789; Name=FC931789; organism=Citrus clementina; type=EST; length=706bpback to top |