FC931789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: UK114_MOUSE (Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 9.428e-34 Identity = 68/124 (54.84%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 230 SNLKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 S +++ + T KAPAA+GPYSQA++ + ++SG +GL P +G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +RVEIE I Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIEAI 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: UK114_HUMAN (Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.608e-33 Identity = 66/124 (53.23%), Postives = 93/124 (75.00%), Query Frame = 2 Query: 230 SNLKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 S ++ + T KAP A+GPYSQA+ + ++SG +G+ P +G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAALP +R+EIE + Sbjct: 3 SLIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEAV 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: UK114_RAT (Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.778e-32 Identity = 66/124 (53.23%), Postives = 92/124 (74.19%), Query Frame = 2 Query: 230 SNLKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 S +++ + T+KAPAA+G YSQA+ + +VSG +G+ P +G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +R+EIE I Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEAI 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: UK114_BOVIN (Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32 Identity = 66/124 (53.23%), Postives = 91/124 (73.39%), Query Frame = 2 Query: 230 SNLKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 S +++ + T KAPAA+GPYSQA+ + ++SG LG+ P +G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF TVN++Y +YF S PARA YQVAALP RVEIE I Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEAI 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: YSD2_CAEEL (UPF0076 protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2 PE=2 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 3.961e-32 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 2 Query: 239 KEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 ++ + + AP A+GPYSQA++A N ++SG LGL P+TG +E QT Q LKN+GE+LKA+GADY +VVKTT+LL ++ DF VNE+Y +YF SP PARA YQVAALP VEIE + Sbjct: 41 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVE-QTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAV 160
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: UK114_CAPHI (Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.966e-31 Identity = 65/124 (52.42%), Postives = 89/124 (71.77%), Query Frame = 2 Query: 230 SNLKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 S ++ + T KAPAA+GPYSQA+ + ++SG LG+ P +G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF VN++Y +YF S PARA YQVAALP RVEIE I Sbjct: 3 SLVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEAI 126
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: Y4SK_RHISN (UPF0076 protein y4sK OS=Rhizobium sp. (strain NGR234) GN=NGR_a01620 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30 Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 2 Query: 242 EAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIVAL 610 E + TN AP A+GPYSQAIK +L FVSG L + P TG+F S +Q EQ LKN+ I +A+G D S VKTT+LL DL DF +N +Y +F +P PARA Y+V ALP A+VEIE +++L Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKNLQAIARAAGTDLSKTVKTTVLLTDLGDFADINRVYTGFFSTPYPARACYEVKALPKGAKVEIEAVISL 125
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: Y944_HELPY (UPF0076 protein HP_0944 OS=Helicobacter pylori GN=HP_0944 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29 Identity = 69/122 (56.56%), Postives = 80/122 (65.57%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 +KE + + AP A+GPYSQAI N+L FVSG LG+ TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA VEIE I Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAI 122
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: Y944_HELPJ (UPF0076 protein jhp_0879 OS=Helicobacter pylori J99 GN=jhp_0879 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29 Identity = 69/122 (56.56%), Postives = 80/122 (65.57%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 +KE + + AP A+GPYSQAI N+L FVSG LG+ TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA VEIE I Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAI 122
BLAST of FC931789 vs. ExPASy Swiss-Prot
Match: Y854_PYRHO (UPF0076 protein PH0854 OS=Pyrococcus horikoshii GN=PH0854 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.319e-27 Identity = 58/122 (47.54%), Postives = 81/122 (66.39%), Query Frame = 2 Query: 236 LKEAVVTNKAPAALGPYSQAIKANNLFFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECI 601 +KE + T AP +GPYSQAIKA N F++G + + P+TG+ V I+DQT QVL+NI IL+A+G + V+K T+ L D+ DF +NE+YA+YF PAR +V+ LP D +EIE I Sbjct: 1 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIEAI 122 The following BLAST results are available for this feature:
BLAST of FC931789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931789 ID=FC931789; Name=FC931789; organism=Citrus clementina; type=EST; length=706bpback to top |