FC931942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 41/107 (38.32%), Postives = 59/107 (55.14%), Query Frame = 3 Query: 105 PITFPASIPPTKSP---ESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 410 P F A+ P S + VGS + ++S E S++ ++Y+G+ +P G+W A+I + K R WLGTF+ EEAARAYD AA+R RG A NF + Sbjct: 79 PFVFTATTKPVASAFVSTGIYLVGSAYAKKTVESAEQAEKSSKRKRKNQYRGIRQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPE 185
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAVL3_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g51120 OS=Arabidopsis thaliana GN=At1g51120 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.263e-12 Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 3 Query: 234 SSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDEL 527 ++K+KGVV Q NG WGAQIY H+R+WLGTF EAA AYD A+ + R DA + + + + E D + + + + I D +H + D L Sbjct: 44 TTKFKGVVQQQNGHWGAQIYADHRRIWLGTFKSAHEAAAAYDSASIKLRSFDA-NSHRNFPWSDFTLHEPDFQECYTTEAVLNMIRDGSYQHKFRDFL 140
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.916e-11 Identity = 39/91 (42.86%), Postives = 52/91 (57.14%), Query Frame = 3 Query: 144 PESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 410 P S RV S + + E+R+ +Y+GV +P G+W A+I + H+ RVWLGTF+ E AARAYD AA RFRG A NF + Sbjct: 45 PSSFARVDSSHNPIEESMSKAFPEEARE-KKRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFPE 134
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: ERF77_ARATH (Ethylene-responsive transcription factor 10 OS=Arabidopsis thaliana GN=ERF10 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.268e-11 Identity = 37/67 (55.22%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 240 KYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSS 434 +Y+GV +P GR+ A+I + K +RVWLG+FN EEAARAYD AA RFRG A TNF + G SS Sbjct: 52 RYRGVRRRPWGRYAAEIRDPVKKKRVWLGSFNTGEEAARAYDSAAIRFRGSKATTNFPLIGYYGISS 118
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 4.268e-11 Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 3 Query: 177 SSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQ 410 S+V + E+ + E K KY+GV +P G+W A+I + H+ RVWLGTF E AARAYD AA RFRG A NF + Sbjct: 43 SAVTKECESSMSLERPK----KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPE 118
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.574e-11 Identity = 39/126 (30.95%), Postives = 60/126 (47.62%), Query Frame = 3 Query: 60 CMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQ--RVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTS 431 C D+ P F ++ P S + GS + + E + + ++Y+G+ +P G+W A+I + + R+WLGTF EEAARAYD AA+R RG A NF + + S Sbjct: 67 CDDDFDVGDVFADVKPFVFTSTPKPAVSAAA---EGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANS 189 The following BLAST results are available for this feature:
BLAST of FC931942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931942 ID=FC931942; Name=FC931942; organism=Citrus clementina; type=EST; length=649bpback to top |