FC931942
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 9.082e-54 Identity = 114/172 (66.28%), Postives = 131/172 (76.16%), Query Frame = 3 Query: 123 SIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHGESDGVATA-FGSERVLK 635 S PP S L R+GSG SSV+LDSE GVE ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAA +YDIA +RFRGRDAVTNFK + D D E AFL +HSK+EIVDMLRKHTY DE EQS+R + ++ +GKR G+ TA +G++ VL+ Sbjct: 33 SSPPATSMR-LYRMGSGGSSVVLDSENGVETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAASSYDIAVRRFRGRDAVTNFK------SQVDGNDAESAFLDAHSKAEIVDMLRKHTYADEFEQSRRKF-VNGDGKR-------SGLETATYGNDAVLR 189
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53 Identity = 117/189 (61.90%), Postives = 134/189 (70.90%), Query Frame = 3 Query: 48 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGKRVIKHG--ESDGVAT 608 M+ S +DE P PA S +L R+GSG SSV+LDSE GVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYD+A RFR RDAVTNFK + DE +++ FL+SHSKSEIVDMLRKHTYN+ELEQSKR + N R + +DGV+T Sbjct: 1 MESSSVDESTTSTGSICETPAITPAK---KSSVGNLYRMGSG-SSVVLDSENGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAVHRFRRRDAVTNFKDV-----KMDEDEVD--FLNSHSKSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVST 178
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 5.887e-53 Identity = 112/178 (62.92%), Postives = 128/178 (71.91%), Query Frame = 3 Query: 48 MDGSCMDEXXXXXXXXXXPPITFPASIPPTKSPESLCRVGSGASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRN---YGLDANGKR 572 MD SC+DE S PP + L R+GSG SSV+LD E G+E ESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNE+EEAAR+YDIAA RFRGRDAV NFK + ++GD +AFL +HSK+EIVDMLRKHTY DELEQ+ + +DANGKR Sbjct: 1 MDSSCIDEISSSTSESFSATTAKKLSPPPAAALR-LYRMGSGGSSVVLDPENGLETESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEQEEAARSYDIAACRFRGRDAVVNFKNV------LEDGD--LAFLEAHSKAEIVDMLRKHTYADELEQNNKRQLFLSVDANGKR 169
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49 Identity = 111/156 (71.15%), Postives = 125/156 (80.13%), Query Frame = 3 Query: 123 SIPPTKS--PESLC-RVGSGASSVILDSEAGVE----AESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNYGLDANGK 569 SIP KS P SL R+GSG +SV+LDSE GVE AESRKLPSS++KGVVPQPNGRWGAQIYEKHQRVWLGTFNEE+EAARAYD+AA RFRGRDAVTNFK T+ +E E+ FL++HSKSEIVDMLRKHTY +EL+Q KRN D NGK Sbjct: 16 SIPARKSSSPASLLYRMGSG-TSVVLDSENGVEVEVEAESRKLPSSRFKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEDEAARAYDVAAHRFRGRDAVTNFKD-----TTFEE---EVEFLNAHSKSEIVDMLRKHTYKEELDQRKRN--RDGNGK 160
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 3.825e-44 Identity = 92/143 (64.34%), Postives = 111/143 (77.62%), Query Frame = 3 Query: 147 ESLCRVGSGASSVILDSEAGVEAESR---------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNY 548 ++L RVGSGAS+V+ +E G EA+S KLPSSKYKGVVPQPNGRWGAQIYE+HQRVWLGTF E EAARAYD+AAQRFRGRDAVTNF+ ++ S E +E+ FL+S SK+E+VDMLRKHTY +EL Q+KR + Sbjct: 28 KALQRVGSGASAVMDAAEPGAEADSGGERRGGGGGKLPSSKYKGVVPQPNGRWGAQIYERHQRVWLGTFTGEAEAARAYDVAAQRFRGRDAVTNFRPLA---ESDPEAAVELRFLASRSKAEVVDMLRKHTYLEELTQNKRAF 167
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.777e-41 Identity = 87/148 (58.78%), Postives = 108/148 (72.97%), Query Frame = 3 Query: 159 RVGSGASSVILDSEAGVEAESR------------------KLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKRNY 548 R+GSGAS+V+ +E G EA+S KLPSSK+KGVVPQPNGRWGAQIYE+HQRVWLGTF E++AARAYD+AAQRFRGRDAVTNF+ ++ + + E+ FL++ SK+E+VDMLRKHTY DEL QSKR + Sbjct: 36 RMGSGASAVVDAAEPGAEADSGSGGRVCGGGGGGAGGAGGKLPSSKFKGVVPQPNGRWGAQIYERHQRVWLGTFAGEDDAARAYDVAAQRFRGRDAVTNFRPLA---EADPDAAAELRFLATRSKAEVVDMLRKHTYFDELAQSKRTF 180
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: Y1407_ORYSJ (Putative AP2/ERF and B3 domain-containing protein Os01g0140700 OS=Oryza sativa subsp. japonica GN=Os01g0140700 PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 6.539e-36 Identity = 83/155 (53.55%), Postives = 98/155 (63.23%), Query Frame = 3 Query: 156 CRVGSGASSVILDSEAGVEAESRKL--------------------------PSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQSKR 542 C GSG SS DS+ E E PSS+YKGVVPQPNGRWGAQIYE+H RVWLGTF +EE AARAYD+AA RFRGRDAVTN + + G S+ E+AFL++HSK+E+VDMLRKHTY+DEL+Q R Sbjct: 12 CNSGSGGSSSTTDSKQEEEEEEELAAMEEDELIHVVQAAELRLPSSTTATRPSSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRFRGRDAVTN-RAPAAEGASAG----ELAFLAAHSKAEVVDMLRKHTYDDELQQGLR 161
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: Y1410_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0141000 OS=Oryza sativa subsp. japonica GN=Os01g0141000 PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.611e-34 Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 3 Query: 174 ASSVILDSEAGVEAESRKLPSSKYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDELEQS-KRNYGLDANGK 569 A V+ A A+ SS+YKGVVPQPNGRWGAQIYE+H RVWLGTF +EE AARAYD+AA R+RGRDA TNF + + E+AFL++HSK+EIVDMLRKHTY DEL Q +R G+ A + Sbjct: 50 ADEVVTSRPAAAAAQQ----SSRYKGVVPQPNGRWGAQIYERHARVWLGTFPDEEAAARAYDVAALRYRGRDAATNFPGAAASAA-------ELAFLAAHSKAEIVDMLRKHTYADELRQGLRRGRGMGARAQ 171
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 50/121 (41.32%), Postives = 69/121 (57.02%), Query Frame = 3 Query: 204 GVEAESRKLPSSKYKGVVPQPNGRWGAQIYE--KHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNF------KQMSCAGT-----SSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDEL 527 G ++ +K SS+YKG+ +P GRW A+I + K RVWLGTFN EEAARAYD+ A+R RG A NF K+ + A T + E D+++A +SS S +D L + D L Sbjct: 12 GSASDGKKKQSSRYKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTL 132
BLAST of FC931942 vs. ExPASy Swiss-Prot
Match: RAVL2_ARATH (AP2/ERF and B3 domain-containing transcription factor At1g50680 OS=Arabidopsis thaliana GN=At1g50680 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.560e-13 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 3 Query: 240 KYKGVVPQPNGRWGAQIYEKHQRVWLGTFNEEEEAARAYDIAAQRFRGRDAVTNFKQMSCAGTSSDEGDIEMAFLSSHSKSEIVDMLRKHTYNDEL 527 KYKGVV Q NG WGAQIY H+R+WLGTF +EAA AYD A+ + R DA + + + + +E D + + + + I D +H + D L Sbjct: 27 KYKGVVQQQNGHWGAQIYADHKRIWLGTFKSADEAATAYDSASIKLRSFDA-NSHRNFPWSTITLNEPDFQNCYTTETVLNMIRDGSYQHKFRDFL 121 The following BLAST results are available for this feature:
BLAST of FC931942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC931942 ID=FC931942; Name=FC931942; organism=Citrus clementina; type=EST; length=649bpback to top |