FC932583
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: UK114_MOUSE (Ribonuclease UK114 OS=Mus musculus GN=Hrsp12 PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34 Identity = 69/125 (55.20%), Postives = 95/125 (76.00%), Query Frame = 2 Query: 245 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 S +++ + T KAPAA+GPYSQA++ + +++SG +GL P +G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +RVEIE IA Sbjct: 3 SIIRKVISTTKAPAAIGPYSQAVQVDRTIYISGQVGLDPSSGQLVPGGVVEEAKQALKNLGEILKAAGCDFNNVVKTTVLLADMNDFGTVNEIYKTYFQGSLPARAAYQVAALPRGSRVEIEAIA 127
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: UK114_HUMAN (Ribonuclease UK114 OS=Homo sapiens GN=HRSP12 PE=1 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.532e-34 Identity = 67/125 (53.60%), Postives = 95/125 (76.00%), Query Frame = 2 Query: 245 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 S ++ + T KAP A+GPYSQA+ + +++SG +G+ P +G+ VS + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY +YF S PARA YQVAALP +R+EIE +A Sbjct: 3 SLIRRVISTAKAPGAIGPYSQAVLVDRTIYISGQIGMDPSSGQLVSGGVAEEAKQALKNMGEILKAAGCDFTNVVKTTVLLADINDFNTVNEIYKQYFKSNFPARAAYQVAALPKGSRIEIEAVA 127
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: UK114_RAT (Ribonuclease UK114 OS=Rattus norvegicus GN=Hrsp12 PE=1 SV=3) HSP 1 Score: 142.124 bits (357), Expect = 2.799e-33 Identity = 67/125 (53.60%), Postives = 94/125 (75.20%), Query Frame = 2 Query: 245 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 S +++ + T+KAPAA+G YSQA+ + ++VSG +G+ P +G+ V + ++ +Q LKN+GEILKA+G D+++VVKTT+LLAD+ DF TVNEIY YF PARA YQVAALP +R+EIE IA Sbjct: 3 SIIRKVISTSKAPAAIGAYSQAVLVDRTIYVSGQIGMDPSSGQLVPGGVAEEAKQALKNLGEILKAAGCDFTNVVKTTVLLADINDFGTVNEIYKTYFQGNLPARAAYQVAALPKGSRIEIEAIA 127
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: UK114_BOVIN (Ribonuclease UK114 OS=Bos taurus GN=HRSP12 PE=2 SV=3) HSP 1 Score: 141.354 bits (355), Expect = 4.774e-33 Identity = 67/125 (53.60%), Postives = 93/125 (74.40%), Query Frame = 2 Query: 245 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 S +++ + T KAPAA+GPYSQA+ + +++SG LG+ P +G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF TVN++Y +YF S PARA YQVAALP RVEIE IA Sbjct: 3 SLVRKIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVAEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSTVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEAIA 127
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: YSD2_CAEEL (UPF0076 protein C23G10.2 OS=Caenorhabditis elegans GN=C23G10.2 PE=2 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.235e-33 Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 2 Query: 254 KEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 ++ + + AP A+GPYSQA++A N +++SG LGL P+TG +E QT Q LKN+GE+LKA+GADY +VVKTT+LL ++ DF VNE+Y +YF SP PARA YQVAALP VEIE +A Sbjct: 41 RQIISSANAPGAIGPYSQAVRAGNTIYLSGSLGLDPKTGDLKEGVVE-QTHQSLKNLGEVLKAAGADYGNVVKTTVLLQNIADFAAVNEVYGQYFKSPYPARAAYQVAALPKGGLVEIEAVA 161
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: UK114_CAPHI (Ribonuclease UK114 OS=Capra hircus GN=HRSP12 PE=1 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32 Identity = 66/125 (52.80%), Postives = 91/125 (72.80%), Query Frame = 2 Query: 245 SNLKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 S ++ + T KAPAA+GPYSQA+ + +++SG LG+ P +G+ V + ++ +Q L NIGEILKA+G D+++VVK T+LLAD+ DF VN++Y +YF S PARA YQVAALP RVEIE IA Sbjct: 3 SLVRRIISTAKAPAAIGPYSQAVLVDRTIYISGQLGMDPASGQLVPGGVVEEAKQALTNIGEILKAAGCDFTNVVKATVLLADINDFSAVNDVYKQYFQSSFPARAAYQVAALPKGGRVEIEAIA 127
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: Y944_HELPY (UPF0076 protein HP_0944 OS=Helicobacter pylori GN=HP_0944 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 71/123 (57.72%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 251 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 +KE + + AP A+GPYSQAI N+LVFVSG LG+ TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA VEIE IA Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFTEPYPARATFQVAKLPKDALVEIEAIA 123
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: Y944_HELPJ (UPF0076 protein jhp_0879 OS=Helicobacter pylori J99 GN=jhp_0879 PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.941e-30 Identity = 71/123 (57.72%), Postives = 82/123 (66.67%), Query Frame = 2 Query: 251 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 +KE + + AP A+GPYSQAI N+LVFVSG LG+ TG+F I QT Q ++NI ILK +G SVVKTTILL L DF VN IY YF P PARAT+QVA LP DA VEIE IA Sbjct: 1 MKEVIHSTLAPKAIGPYSQAIATNDLVFVSGQLGIDVSTGEFKGADIHSQTTQSMENIKAILKEAGLGMDSVVKTTILLKSLDDFAVVNGIYGSYFKEPYPARATFQVAKLPKDALVEIEAIA 123
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: Y4SK_RHISN (UPF0076 protein y4sK OS=Rhizobium sp. (strain NGR234) GN=NGR_a01620 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.101e-29 Identity = 65/123 (52.85%), Postives = 84/123 (68.29%), Query Frame = 2 Query: 257 EAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIAAL 625 E + TN AP A+GPYSQAIK +L+FVSG L + P TG+F S +Q EQ LKN+ I +A+G D S VKTT+LL DL DF +N +Y +F +P PARA Y+V ALP A+VEIE + +L Sbjct: 3 EPISTNDAPGAVGPYSQAIKVGDLLFVSGQLPIDPATGEFNSANAVEQAEQCLKNLQAIARAAGTDLSKTVKTTVLLTDLGDFADINRVYTGFFSTPYPARACYEVKALPKGAKVEIEAVISL 125
BLAST of FC932583 vs. ExPASy Swiss-Prot
Match: Y854_PYRHO (UPF0076 protein PH0854 OS=Pyrococcus horikoshii GN=PH0854 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 3.541e-28 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 251 LKEAVVTNKAPAALGPYSQAIKANNLVFVSGVLGLVPETGKFVSDTIEDQTEQVLKNIGEILKASGADYSSVVKTTILLADLKDFKTVNEIYAKYFPSPAPARATYQVAALPLDARVEIECIA 619 +KE + T AP +GPYSQAIKA N +F++G + + P+TG+ V I+DQT QVL+NI IL+A+G + V+K T+ L D+ DF +NE+YA+YF PAR +V+ LP D +EIE IA Sbjct: 1 MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEIVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGESKPARVAVEVSRLPKDVLIEIEAIA 123 The following BLAST results are available for this feature:
BLAST of FC932583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932583 ID=FC932583; Name=FC932583; organism=Citrus clementina; type=EST; length=719bpback to top |