FC932602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_BOVIN (Natural resistance-associated macrophage protein 1 OS=Bos taurus GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.184e-46 Identity = 99/195 (50.77%), Postives = 126/195 (64.62%), Query Frame = 3 Query: 111 TREGESGSKDSNETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 TR G S S E P +PP T EKI I D +S + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 13 TRYGSISSPPSPE-----PQQAPPGGTY--------LSEKIPIPDTESGT-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRILLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITVVDTFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_BISBI (Natural resistance-associated macrophage protein 1 OS=Bison bison GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.184e-46 Identity = 99/195 (50.77%), Postives = 126/195 (64.62%), Query Frame = 3 Query: 111 TREGESGSKDSNETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 TR G S S E P +PP T EKI I D +S + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 13 TRYGSISSPPSPE-----PQQAPPGGTY--------LSEKIPIPDTESGT-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRILLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITIVDAFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_SHEEP (Natural resistance-associated macrophage protein 1 OS=Ovis aries GN=SLC11A1 PE=2 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 2.020e-46 Identity = 98/193 (50.78%), Postives = 129/193 (66.84%), Query Frame = 3 Query: 120 GESGSKDSNETNRLLPIPSPPS-STEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 G++G+ + T R I SPPS + EKI I D +S + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 3 GDTGTPNQGGT-RYGSISSPPSPGPQQAPPGGTYLSEKIPIPDTESGA-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTLLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITIVDTFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_BUBBU (Natural resistance-associated macrophage protein 1 OS=Bubalus bubalis GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 2.638e-46 Identity = 98/193 (50.78%), Postives = 127/193 (65.80%), Query Frame = 3 Query: 120 GESGSKDSNETNRLLPIPSPPS-STEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 G++G T R I SPPS + EKI I D +S + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 3 GDTGPSKQGGT-RYGSISSPPSPGPQQAPPGGTYLGEKIPIPDTESGA-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRILLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITVVDTFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_CEREL (Natural resistance-associated macrophage protein 1 OS=Cervus elaphus GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.499e-46 Identity = 89/157 (56.69%), Postives = 115/157 (73.25%), Query Frame = 3 Query: 225 EKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 EKI I D +S + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 38 EKIPIPDTESGA-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRILLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITIVDTFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_CHICK (Natural resistance-associated macrophage protein 1 OS=Gallus gallus GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 7.675e-46 Identity = 84/144 (58.33%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 264 LNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +++ P FS++KLW FTGPGFLMSIA+LDPGN+E DLQ GA+AG+ LLW+L+WAT++GLL Q L+ R+GV TG+ LAE+C YP R +LW M E+A+IG+D+QEVIG+AIA +LS G +PLW GV+IT D FLF Sbjct: 48 ISIPKGSTPGFSFRKLWAFTGPGFLMSIAYLDPGNVESDLQCGAVAGFKLLWVLLWATVLGLLCQRLAIRLGVVTGKDLAEICYLYYPRVPRVLLWLMMEIAIIGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITITDTLFFLF 191
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_HUMAN (Natural resistance-associated macrophage protein 1 OS=Homo sapiens GN=SLC11A1 PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.002e-45 Identity = 84/134 (62.69%), Postives = 107/134 (79.85%), Query Frame = 3 Query: 294 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R VLW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 53 FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRTVLWLTIELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITIVDTFFFLF 186
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_MOUSE (Natural resistance-associated macrophage protein 1 OS=Mus musculus GN=Slc11a1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.710e-45 Identity = 88/157 (56.05%), Postives = 114/157 (72.61%), Query Frame = 3 Query: 225 EKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 EKI I AD + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AI+ +LS G +PLW GV+IT +D F FLF Sbjct: 38 EKIPIPSADQGT-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEVCHLYYPKVPRILLWLTIELAIVGSDMQEVIGTAISFNLLSAGRIPLWGGVLITIVDTFFFLF 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_PIG (Natural resistance-associated macrophage protein 1 OS=Sus scrofa GN=SLC11A1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.108e-44 Identity = 89/177 (50.28%), Postives = 121/177 (68.36%), Query Frame = 3 Query: 165 PIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 P P PP ++ EKI I +A+ + FS +KLW FTGPGFLMSIA+LDPGN++ DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FL+ Sbjct: 22 PSPGPPQVPPGGTYLS----EKIPIPNAEPGT-----------FSLRKLWAFTGPGFLMSIAYLDPGNIQSDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEICHLYYPKVPRTLLWLNMELAIVGSDMQEVIGTAIAFNLLSAGRIPLWGGVLITVVDTFFFLY 183
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAML_CAEEL (NRAMP-like transporter smf-1 OS=Caenorhabditis elegans GN=smf-1 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.469e-44 Identity = 98/209 (46.89%), Postives = 137/209 (65.55%), Query Frame = 3 Query: 141 SNETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPP-FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIF-LF*RLWSEELELFCCIIALWLIVA 761 SN + P P T++D + +L DA+S +++ D V FS+KKLW FTGPGFLMSIA+LDPGN+E DLQSGA A Y LLW+L+ A ++G+L+Q +SAR+GV +G+H+AE+ + YP R +LW M E+A++ +D+QEVIG+AIAI +LS G +PL+ GV IT LD F F L R +LEL + L + V+ Sbjct: 4 SNNDGPIEPEAEPWRITQNDH-----LEQDLLEEDAESQERVDIPVDDVEKAFSFKKLWAFTGPGFLMSIAYLDPGNIESDLQSGAQAAYKLLWVLLSAHIIGMLLQRMSARLGVVSGKHMAEVAYQFYPRLPRIILWLMIEIAIVCSDMQEVIGTAIAIFLLSKGFVPLYVGVFITILDTFTFLLIDRYGIRKLELIFGFLILTMTVS 207 The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bpback to top |