FC932602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM2_ARATH (Metal transporter Nramp2 OS=Arabidopsis thaliana GN=NRAMP2 PE=2 SV=1) HSP 1 Score: 288.886 bits (738), Expect = 2.212e-77 Identity = 146/187 (78.07%), Postives = 160/187 (85.56%), Query Frame = 3 Query: 147 ETNRLLPIPSPPS----STEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 E +RLLP P PPS ST+ + E AF++ EKILIVD +S GD PPFSW+KLWLFTGPGFLMSIAFLDPGNLEGDLQ+GAIAGYSLLWLLMWAT MGLLIQ+LSARVGVATGRHLAELCR+EYP WAR+VLW MAE+ALIGADIQEVIGSAIAIQILS G LPLWAGV+ITA DCF+FLF Sbjct: 12 EEDRLLP-PPPPSQSLPSTDSESEAAFETNEKILIVDFESPDDPTT-GDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELALIGADIQEVIGSAIAIQILSRGFLPLWAGVVITASDCFLFLF 196
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM3_ARATH (Metal transporter Nramp3 OS=Arabidopsis thaliana GN=NRAMP3 PE=2 SV=2) HSP 1 Score: 271.552 bits (693), Expect = 3.655e-72 Identity = 131/170 (77.06%), Postives = 148/170 (87.06%), Query Frame = 3 Query: 192 EDDEEVAFDSREKILIVDADSASTLN--VDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 E++EE A+D EK+ IV + L V PPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQ+GA+AGYSLLWLLMWAT MGLL+QLLSAR+GVATGRHLAELCR+EYP WAR VLW MAE+ALIG+DIQEVIGSAIAI+ILS+G+LPLWAGV+ITALDCF+FLF Sbjct: 15 EEEEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYPTWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFLF 184
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM4_ARATH (Metal transporter Nramp4 OS=Arabidopsis thaliana GN=NRAMP4 PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 3.094e-71 Identity = 135/186 (72.58%), Postives = 153/186 (82.26%), Query Frame = 3 Query: 144 NETNRLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGD--QVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +ET+R P+ + EE A++ EK+LIV D + D D P FSWKKLWLFTGPGFLMSIAFLDPGNLE DLQ+GAIAGYSL+WLLMWAT +GLLIQLLSAR+GVATGRHLAELCREEYP WAR VLW MAE+ALIGADIQEVIGSAIAI+ILS+G++PLWAGV+ITALDCFIFLF Sbjct: 2 SETDRERPLLA-------SEERAYEETEKVLIVGIDEEEDADYDDDPGNSPKFSWKKLWLFTGPGFLMSIAFLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMVLWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITALDCFIFLF 180
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM5_ARATH (Metal transporter Nramp5 OS=Arabidopsis thaliana GN=NRAMP5 PE=2 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 1.217e-67 Identity = 130/203 (64.04%), Postives = 153/203 (75.37%), Query Frame = 3 Query: 96 MDSSETREGESGSKDSNETN---RLLPIPSPPSSTEDDEEVAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 M S E+ K N++N + L +P S E+DE +IL V+ D T D VPPFSW KLW FTGPGFLMSIAFLDPGN+EGDLQ+GA+AGYSLLWLL+WATLMGLL+QLLSAR+GVATGRHLAE+CR EYP+WAR +LWFMAEVALIGADIQEVIGSAIA+QIL+ G LP+W GVIIT+ DCF+ + Sbjct: 1 MTGSTVSRQENSPKRPNDSNGEFKRLLVPET-SQPEEDELHESPPENQILNVEEDRDKTY----DSVPPFSWAKLWKFTGPGFLMSIAFLDPGNIEGDLQAGAVAGYSLLWLLLWATLMGLLMQLLSARIGVATGRHLAEICRSEYPSWARILLWFMAEVALIGADIQEVIGSAIALQILTRGFLPIWVGVIITSFDCFLISY 198
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_DICDI (Metal transporter nramp1 homolog OS=Dictyostelium discoideum GN=nramp1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 4.645e-51 Identity = 97/168 (57.74%), Postives = 128/168 (76.19%), Query Frame = 3 Query: 267 NVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF*RLWS-EELE-LFCCIIALWLIVAG 764 N+D ++K LW FTGPGFLMSIA+LDPGNLE D+Q+GA+AGY LLW+L W+T++G +Q+L++R+GV TG+HLAE CRE+YP R +LW M E+A+IG+DIQEVIG+AIA+QILS+G +PLWAGV+ TA D F FLF + +LE FC +IA+ I G Sbjct: 60 NIDKPDSKWINFKTLWAFTGPGFLMSIAYLDPGNLESDIQAGAMAGYQLLWVLFWSTVIGFWLQMLASRLGVVTGKHLAEHCREQYPKTPRLLLWLMTELAIIGSDIQEVIGTAIALQILSNGHIPLWAGVLFTAADTFTFLFLEKYGIRKLEAFFCSLIAIMAISFG 227
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM2_MOUSE (Natural resistance-associated macrophage protein 2 OS=Mus musculus GN=Slc11a2 PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.933e-50 Identity = 108/211 (51.18%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 72 VDKTKKVKMDSSETREGESGSKDSNETNRLLPIPSPPSSTEDDEE---VAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +D +K+ D + G+S S + N S P ST D EE FD EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ AT++GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D+QEVIGSAIAI +LS G +PLW GV+IT D F+FLF Sbjct: 3 LDPKEKMPDDGASGDHGDSASLGA--INPAYSNSSLPHSTGDSEEPFTTYFD--EKIPIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLWGGVLITIADTFVFLF 198
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM2_HUMAN (Natural resistance-associated macrophage protein 2 OS=Homo sapiens GN=SLC11A2 PE=1 SV=2) HSP 1 Score: 197.978 bits (502), Expect = 5.136e-50 Identity = 108/205 (52.68%), Postives = 137/205 (66.83%), Query Frame = 3 Query: 84 KKVKMDSSETREGESGSKDSNETNRLLPIPSPPSSTEDDEEV-AFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +K+ DS GES S + N PS S D EE A EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ ATL+GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D+QEVIGSAIAI +LS G +PLW GV+IT D F+FLF Sbjct: 7 QKMSDDSVSGDHGESASLGN--INPAYSNPSLSQSPGDSEEYFATYFNEKISIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWILLLATLVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRVILWLMVELAIIGSDMQEVIGSAIAINLLSVGRIPLWGGVLITIADTFVFLF 198
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MVL_DROME (Protein Malvolio OS=Drosophila melanogaster GN=Mvl PE=2 SV=2) HSP 1 Score: 196.438 bits (498), Expect = 1.494e-49 Identity = 94/162 (58.02%), Postives = 124/162 (76.54%), Query Frame = 3 Query: 210 AFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 A+ S EK+LI D DS + FS++KLW FTGPGFLMSIA+LDPGN+E D+QSGA A Y +LW+L+WAT++GLL+Q L+AR+GV TG HLAE+C +Y R++LW M E+A+IG+D+QEVIG+AIAI +LS+ V+PLW GV+IT +D F FLF Sbjct: 53 AYFSDEKVLIPDDDSTNV---------GFSFRKLWAFTGPGFLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLF 205
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM2_RAT (Natural resistance-associated macrophage protein 2 OS=Rattus norvegicus GN=Slc11a2 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.549e-49 Identity = 107/211 (50.71%), Postives = 141/211 (66.82%), Query Frame = 3 Query: 72 VDKTKKVKMDSSETREGESGSKDSNETNRLLPIPSPPSSTEDDEE---VAFDSREKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +D +K+ D + G+S S + N S P ST D EE FD EKI I + + + FS++KLW FTGPGFLMSIA+LDPGN+E DLQSGA+AG+ LLW+L+ AT++GLL+Q L+AR+GV TG HLAE+C +YP R +LW M E+A+IG+D+QEVIGSAIAI +LS G +PL+ GV+IT D F+FLF Sbjct: 3 LDPEEKIPDDGASGDHGDSASLGA--INPAYSNSSLPHSTGDSEEPFTTYFD--EKIPIPEEEYSC-----------FSFRKLWAFTGPGFLMSIAYLDPGNIESDLQSGAVAGFKLLWVLLLATIVGLLLQRLAARLGVVTGLHLAEVCHRQYPKVPRIILWLMVELAIIGSDMQEVIGSAIAINLLSAGRVPLYGGVLITIADTFVFLF 198
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_CANFA (Natural resistance-associated macrophage protein 1 OS=Canis familiaris GN=SLC11A1 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 9.066e-47 Identity = 98/193 (50.78%), Postives = 127/193 (65.80%), Query Frame = 3 Query: 126 SGSKDSNETNR--LLPIPSPPSSTEDDEEVAFDS-REKILIVDADSASTLNVDGDQVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 +G KD +R I PPSS E + EKI I D + + FS +KLW FTGPGFLMSIAFLDPGN+E DLQ+GA+AG+ LLW+L+WAT++GLL Q L+AR+GV TG+ L E+C YP R +LW E+A++G+D+QEVIG+AIA +LS G +PLW GV+IT +D F FLF Sbjct: 2 TGDKDPQSVSRPNYGSISHPPSSEPQQEPLRTTYLSEKIPIPDTEPGT-----------FSLRKLWAFTGPGFLMSIAFLDPGNIESDLQAGAVAGFKLLWVLLWATVLGLLCQRLAARLGVVTGKDLGEICHLYYPKVPRTLLWLTIELAIVGSDMQEVIGTAIAFSLLSAGRIPLWGGVLITIVDTFFFLF 183 The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bpback to top |