FC932602

Overview
NameFC932602
Unique NameFC932602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO81 (Manganese transport protein mntH OS=Escherichia coli O81 (strain ED1a) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO7I (Manganese transport protein mntH OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO5E (Manganese transport protein mntH OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO57 (Manganese transport protein mntH OS=Escherichia coli O157:H7 GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO55 (Manganese transport protein mntH OS=Escherichia coli (strain 55989 / EAEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO45 (Manganese transport protein mntH OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECO24 (Manganese transport protein mntH OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_LACC3 (Probable manganese transport protein mntH OS=Lactobacillus casei (strain ATCC 334) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 66/184 (35.87%), Postives = 108/184 (58.70%), Query Frame = 3 
Query:  222 REKIL-IVDADSASTLNVDGDQVPPFS---WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFI-FLF*RLWSEELELFCCIIALWLIV 758
            RE I+   D  S S   V+G    P +   WK L  +TGPG L+++ ++DPGN    +  GA   YSLL +++ ++L+ +L+Q ++AR+G+ TGR LA++ R+         LW + E+A++  DI E+IGSAIA+++L +  +PL  G+IIT  D  I  L  RL   ++E     + L +++
Sbjct:   10 REHIIHFEDTASKSLDEVNGSVEVPHNAGFWKTLAAYTGPGILVAVGYMDPGNWITSIAGGASFKYSLLSVILISSLIAMLLQAMAARLGIVTGRDLAQMTRDHTSKAMGGFLWVITELAIMATDIAEIIGSAIALKLLFN--MPLIVGIIITTADVLILLLLMRLGFRKIEAVVATLVLVILL 191
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ENTS8 (Probable manganese transport protein mntH OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQVLSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ENT38 (Probable manganese transport protein mntH OS=Enterobacter sp. (strain 638) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.408e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYKLLWVVVWANLMAMLIQVLSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_ECO811.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO7I1.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO5E1.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO571.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO551.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO451.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECO241.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_LACC31.408e-2335.87Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_ENTS81.408e-2340.65Probable manganese transport protein mntH OS=Enter... [more]
MNTH_ENT381.408e-2340.65Probable manganese transport protein mntH OS=Enter... [more]

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Properties
Property NameValue
Genbank descriptionC34210D06EF PostHarveN Citrus clementina cDNA clone C34210D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bp
GCCGGCTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACTGC
CGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATGGA
CTCCTCCGAAACCCGAGAAGGAGAAAGCGGGTCCAAAGACAGCAATGAAA
CCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACGAC
GAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCAGA
TTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTCGT
GGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAGCG
TTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATAGC
AGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTTGC
TTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACTTG
GCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTGTG
GTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATATTCAGGAAGTAATTG
GGAGTGCCATTGCTATCCAGATTTTGAGTCACGGGGTCTTGCCACTATGG
GCCGGTGTCATCATTACGGCGTTGGATTGTTTCATATTTTTATTTTAGAG
ACTATGGAGTGAGGAACTGGAGCTGTTTTGCTGTATAATTGCACTATGGC
TTATCGTTGCTGGATGTTGCGACCACACCAGTGAAAAAAAAAAAAAA
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