FC932602

Overview
NameFC932602
Unique NameFC932602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_BACSU (Manganese transport protein mntH OS=Bacillus subtilis GN=mntH PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 9.129e-23
Identity = 50/125 (40.00%), Postives = 81/125 (64.80%), Query Frame = 3
Query:  318 FTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            F GP F+ +IA++DPGN   ++ +G+  GY LLW+++++ +M LLIQ LSA++G+ATG++L E+ REE+P      LW   E+ +I  D+ E IG+A+ + +L    +P+    II A+  F  L
Sbjct:   33 FLGPAFIAAIAYIDPGNFATNISAGSKYGYMLLWVILFSNIMALLIQSLSAKLGIATGKNLPEVAREEFPKPVSIGLWIQGELVIIATDLAEFIGAALGLYLLFG--IPMLEASIIAAIGSFAIL 155          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAHJ (Probable manganese transport protein mntH OS=Staphylococcus haemolyticus (strain JCSC1435) GN=mntH PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22
Identity = 52/131 (39.69%), Postives = 85/131 (64.89%), Query Frame = 3
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+AT + LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT  D F+ LF
Sbjct:   29 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQFGYTLLFVILISSLSAMLLQSMTVRLGIATDKDLAQMTRHYLNKPTAIIFWVIAELAIIATDIAEVIGSAIALDLLFN--IPLIIGALITVFDVFLLLF 157          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH1_PSEAE (Manganese transport protein mntH1 OS=Pseudomonas aeruginosa GN=mntH1 PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.192e-22
Identity = 52/130 (40.00%), Postives = 87/130 (66.92%), Query Frame = 3
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            +KL LF GPG L+S+ ++DPGN    +++G+  GY+LL++++ A+  G+L+Q L +R+G+ATGR LA+L RE Y        W +AE++++  D+ EV+G+A+A  +L    + +  GV++TA D  I L
Sbjct:   32 RKLALFVGPGLLVSVGYMDPGNWATAIEAGSRFGYALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVATDLAEVLGAALAFHLLLG--VSITTGVVLTAFDTLIVL 159          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAES (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 12228) GN=mntH PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 52/131 (39.69%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ ++    +PL  G +IT  D F+ LF
Sbjct:   36 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFIILISSLSAMLLQSMTVRLGIATGMDLAQMTRHFLNKPVAIMFWIIAELAIIATDIAEVIGSAIALDLIFG--IPLIVGALITVFDVFLLLF 164          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAEQ (Probable manganese transport protein mntH OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=mntH PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 52/131 (39.69%), Postives = 84/131 (64.12%), Query Frame = 3
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ ++    +PL  G +IT  D F+ LF
Sbjct:   36 QKFLAFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFIILISSLSAMLLQSMTVRLGIATGMDLAQMTRHFLNKPVAIMFWIIAELAIIATDIAEVIGSAIALDLIFG--IPLIVGALITVFDVFLLLF 164          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_LACPL (Probable manganese transport protein mntH OS=Lactobacillus plantarum GN=mntH PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 59/173 (34.10%), Postives = 102/173 (58.96%), Query Frame = 3
Query:  183 SSTEDDEEVAFDSREKILIVDADSASTLNVDGD-QVPPFS--WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            + T+D  ++     + I    ADS S   V+G  +VP  +  W+ L  +TGPG L+++ ++DPGN    +  G+   Y+LL +++ ++L+ +L+Q ++AR+G+ TG+ LA+L RE         LW + E+A++  D+ E+IGS IA+++L     PL  G++IT  D  I L
Sbjct:    4 AKTKDHAKMKAAEEKAIHSTGADSKSLDEVNGSVRVPKDASFWRTLIAYTGPGALVAVGYMDPGNWITSIAGGSQYKYALLSVILLSSLIAMLLQAMAARLGIVTGKDLAQLTRERTSKGMGIFLWIITELAIMATDVAEIIGSGIALKLLFG--FPLIVGILITTADVLILL 174          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ERWT9 (Probable manganese transport protein mntH OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=mntH PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.557e-22
Identity = 50/123 (40.65%), Postives = 83/123 (67.48%), Query Frame = 3
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA +M ++IQL+SA++G+ATG++LAE  R+ +P  A +  W  AE+  +  D+ E IG+AI  +++  GV  L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASYGYQLLWVVVWANVMAMVIQLMSAKLGIATGKNLAEHIRDRFPRPAVWFYWVQAEIIAMATDLAEFIGAAIGFKLV-FGV-TLLQGAMLTGVATFLIL 143          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_MYCTU (Probable manganese transport protein mntH OS=Mycobacterium tuberculosis GN=mntH PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  297 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            S K  W   GP F+ +IA++DPGN+  ++ SGA  GY LLW+++ A +M  L+Q LSA++G+ TGR L E   +     AR   W  AE+  +  D+ EVIG AIA++I+ +  LPL  G IIT +   + L
Sbjct:   28 SLKTSWYLLGPAFVAAIAYVDPGNVAANVSSGAQFGYLLLWVIVAANVMAALVQYLSAKLGLVTGRSLPEAIGKRMGRPARLAYWAQAEIVAMATDVAEVIGGAIALRIMFN--LPLPIGGIITGVVSLLLL 157          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_MYCBO (Probable manganese transport protein mntH OS=Mycobacterium bovis GN=mntH PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.728e-22
Identity = 55/132 (41.67%), Postives = 80/132 (60.61%), Query Frame = 3
Query:  297 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            S K  W   GP F+ +IA++DPGN+  ++ SGA  GY LLW+++ A +M  L+Q LSA++G+ TGR L E   +     AR   W  AE+  +  D+ EVIG AIA++I+ +  LPL  G IIT +   + L
Sbjct:  284 SLKTSWYLLGPAFVAAIAYVDPGNVAANVSSGAQFGYLLLWVIVAANVMAALVQYLSAKLGLVTGRSLPEAIGKRMGRPARLAYWAQAEIVAMATDVAEVIGGAIALRIMFN--LPLPIGGIITGVVSLLLL 413          
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: SMF3_YEAST (Iron transporter SMF3 OS=Saccharomyces cerevisiae GN=SMF3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.722e-21
Identity = 53/130 (40.77%), Postives = 79/130 (60.77%), Query Frame = 3
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            +K   F GPG L+S+A++DPGN    +  GA   Y+LL+ +  + +  +L+Q L  ++G  TG  LAE CR   P    + L+  AEVA+I  D+ EV+G+AIA+QIL    +PL  GV++T LD  + L
Sbjct:    9 QKFAKFIGPGILVSVAYMDPGNYATSVSGGAQYKYTLLFSIFISNIFAVLLQCLCVKLGTITGYDLAENCRHNLPKKLNYTLYLFAEVAIIATDLAEVVGTAIALQILFK--IPLTWGVLLTVLDVLVIL 136          
The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_BACSU9.129e-2340.00Manganese transport protein mntH OS=Bacillus subti... [more]
MNTH_STAHJ1.192e-2239.69Probable manganese transport protein mntH OS=Staph... [more]
MNTH1_PSEAE1.192e-2240.00Manganese transport protein mntH1 OS=Pseudomonas a... [more]
MNTH_STAES1.557e-2239.69Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAEQ1.557e-2239.69Probable manganese transport protein mntH OS=Staph... [more]
MNTH_LACPL1.557e-2234.10Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_ERWT91.557e-2240.65Probable manganese transport protein mntH OS=Erwin... [more]
MNTH_MYCTU7.728e-2241.67Probable manganese transport protein mntH OS=Mycob... [more]
MNTH_MYCBO7.728e-2241.67Probable manganese transport protein mntH OS=Mycob... [more]
SMF3_YEAST1.722e-2140.77Iron transporter SMF3 OS=Saccharomyces cerevisiae ... [more]

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Properties
Property NameValue
Genbank descriptionC34210D06EF PostHarveN Citrus clementina cDNA clone C34210D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bp
GCCGGCTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACTGC
CGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATGGA
CTCCTCCGAAACCCGAGAAGGAGAAAGCGGGTCCAAAGACAGCAATGAAA
CCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACGAC
GAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCAGA
TTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTCGT
GGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAGCG
TTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATAGC
AGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTTGC
TTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACTTG
GCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTGTG
GTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATATTCAGGAAGTAATTG
GGAGTGCCATTGCTATCCAGATTTTGAGTCACGGGGTCTTGCCACTATGG
GCCGGTGTCATCATTACGGCGTTGGATTGTTTCATATTTTTATTTTAGAG
ACTATGGAGTGAGGAACTGGAGCTGTTTTGCTGTATAATTGCACTATGGC
TTATCGTTGCTGGATGTTGCGACCACACCAGTGAAAAAAAAAAAAAA
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