FC932602
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM6_ARATH (Metal transporter Nramp6 OS=Arabidopsis thaliana GN=NRAMP6 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.705e-33 Identity = 67/132 (50.76%), Postives = 93/132 (70.45%), Query Frame = 3 Query: 297 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692 SWK + + GPGFL+SIA++DPGN E DLQSGA Y LLW+++ A+ L+IQ L+A +GV TG+HLAE CR EY F+LW +AE+A++ DI EVIG+A A+ +L + +P+W GV++T L I L Sbjct: 34 SWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFN--IPVWIGVLLTGLSTLILL 163
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM1_ARATH (Metal transporter Nramp1 OS=Arabidopsis thaliana GN=NRAMP1 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.271e-32 Identity = 66/132 (50.00%), Postives = 92/132 (69.70%), Query Frame = 3 Query: 297 SWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692 SWK + + GPGFL+SIA++DPGN E DLQ+GA Y LLW+++ A+ L+IQ L+A +GV TG+HLAE CR EY F+LW +AE+A++ DI EVIG+A A+ +L +P+W GV++T L I L Sbjct: 42 SWKNFFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFS--IPVWIGVLLTGLSTLILL 171
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_RHILO (Probable manganese transport protein mntH OS=Rhizobium loti GN=mntH PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.130e-31 Identity = 71/157 (45.22%), Postives = 105/157 (66.88%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCF-IFLF*RLWSEELELFCCIIALWLIVAGC 767 +++L+ F GPG+++S+ ++DPGN DL GA GY+LL+++M + LM +L+Q L+AR+G+ATGR LA+ CR YP FVLW E+A+I D+ EVIG+AIA+++L +PL G I+TALD F + L LE F +IAL +I+ C Sbjct: 42 FRRLFAFMGPGYMVSVGYMDPGNWATDLAGGAQFGYTLLFVIMLSNLMAILLQALAARLGIATGRDLAQACRAYYPRPVNFVLWIACELAIIACDLAEVIGTAIALKLLFG--IPLIGGAILTALDAFLVLLLMNKGFRYLEAF--VIALLIIIFSC 194
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ANASP (Probable manganese transport protein mntH OS=Anabaena sp. (strain PCC 7120) GN=mntH PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.231e-28 Identity = 59/132 (44.70%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695 W+K+ + GPG+L+S+ ++DPGN D+ G+ GY+LL +++ + LM +L+Q L R+GVATGR LA+ CR+ + F LW + E+A+ D+ E++GSAIA+Q+L V+PL GV ITALD + LF Sbjct: 26 WRKMLAYAGPGYLVSVGYIDPGNWATDIAGGSKFGYTLLTVILLSNLMAILLQSLCVRLGVATGRDLAQACRDYFSPKVSFCLWVLCEIAIAACDLAELLGSAIALQLLF--VIPLIWGVCITALDVLVLLF 155
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_XANAC (Probable manganese transport protein mntH OS=Xanthomonas axonopodis pv. citri GN=mntH PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28 Identity = 67/157 (42.68%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALD-CFIFLF*RLWSEELELFCCIIALWLIVAGC 767 W +L F GPG+++S+ ++DPGN DL G+ GY LL +++ + LM +++Q LSAR+G+ATG LA+ CR YP LW + E+A+I D+ EVIG+AIA+++L +PL G IITA+D + L LE F +IAL LI+ C Sbjct: 35 WSRLLAFLGPGYMVSVGYMDPGNWATDLAGGSQFGYLLLSVILLSNLMAIVLQGLSARLGIATGLDLAQACRARYPRGVNLALWGICELAIIACDLAEVIGTAIALKLLFG--IPLTMGAIITAVDVVLVLLLMNRGFRALEAF--VIALLLIIFAC 187
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_BRAJA (Probable manganese transport protein mntH OS=Bradyrhizobium japonicum GN=mntH PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27 Identity = 65/157 (41.40%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF*RLWSEELE-LFCCIIALWLIVAGC 767 W++L F GPG+L+S+ ++DPGN DL G+ GY+LL +++ + LM +L+Q L+AR+G+ T R LA+ CR Y F+LW E A+I D+ EVIG+AIA+++L +PL G +I ALD F+ L L + L +IAL ++A C Sbjct: 41 WRRLLAFVGPGYLVSVGYMDPGNWATDLAGGSKFGYTLLSVILLSNLMAILLQSLAARLGIVTDRDLAQACRATYSPAVNFLLWLACEAAIIACDLAEVIGTAIALKLLFG--IPLIGGALIAALDAFLLLL--LMNRGFRFLEAFVIALLAVIAVC 193
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_XANCP (Probable manganese transport protein mntH OS=Xanthomonas campestris pv. campestris GN=mntH PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 6.109e-27 Identity = 66/157 (42.04%), Postives = 98/157 (62.42%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALD-CFIFLF*RLWSEELELFCCIIALWLIVAGC 767 W +L F GPG+++S+ ++DPGN DL G+ GY LL +++ + LM +++Q LSAR+G+ATG LA+ CR YP LW + E+A+I D+ EVIG+AIA+++L +PL G IITALD + L LE F ++AL L++ C Sbjct: 35 WFRLLAFLGPGYMVSVGYMDPGNWATDLAGGSQFGYLLLSVILLSNLMAIVLQGLSARLGIATGLDLAQACRARYPRGINLALWGLCELAIIACDLAEVIGTAIALKLLFG--IPLTLGAIITALDVVLVLLLMNRGFRALEAF--VMALLLVIFVC 187
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_PEDPA (Probable manganese transport protein mntH OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=mntH PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.979e-27 Identity = 70/182 (38.46%), Postives = 116/182 (63.74%), Query Frame = 3 Query: 225 EKILIVDADSASTLNVDGDQVPPFS--WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFI-FLF*RLWSEELE-LFCCIIALWLIV 758 EK+ VD+ S +N +VP + WK L ++GPGFL+++ ++DPGN + GA Y+LL +++ ++L+ +L+Q +SAR+G+ TG+ LA+L RE F+LW +AE+A++ DI E+IGS IA+++L H +PL G++ITA D I L +L ++E + ++A+ LIV Sbjct: 3 EKLDEVDSKSLDEIN-GSIKVPKNAGFWKTLMAYSGPGFLIAVGYMDPGNWITSIAGGAQFRYTLLSVILLSSLIAMLLQAMSARLGIVTGKDLAQLTRERTSKRVGFLLWIVAELAIMATDIAEIIGSGIALELLFH--IPLIIGILITAADVLILLLLMKLGFRKIEAIVATLVAVILIV 181
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ACICJ (Probable manganese transport protein mntH OS=Acidiphilium cryptum (strain JF-5) GN=mntH PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.042e-26 Identity = 66/157 (42.04%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 300 WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCF-IFLF*RLWSEELELFCCIIALWLIVAGC 767 W+ +F GP + SIA++DPGN ++Q+GA GY LLW+++ A+L+ +L Q LSAR+G+ TGR+LAELCR+ P +W ++E+A + D+ E +G AI I +L+H LPL AG+ IT + + I L R +EL I AL ++A C Sbjct: 28 WRNPLIFAGPAVVASIAYMDPGNFATNIQAGARYGYDLLWVVLLASLIAMLFQGLSARLGIVTGRNLAELCRDTLPPALTIPMWIISEIAAMATDLAEFLGGAIGIALLAH--LPLMAGMAITGIVTYGILLLDRRGFRPMEL--VIGALVGVIALC 180
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: NRAM2_DICDI (Natural resistance-associated macrophage protein 2 homolog OS=Dictyostelium discoideum GN=nramp2 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.322e-26 Identity = 62/150 (41.33%), Postives = 92/150 (61.33%), Query Frame = 3 Query: 294 FSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF*RLWS-EELELFCCII 740 FS KKL F GP +S+ ++DPGN DL+ G+ GY L+W+L+++ +M L +Q L ++ + T LA+ CR+EY LW + E+A+I D+ EVIG+AI + IL LPL AGV IT+LD +FL + W +LEL ++ Sbjct: 145 FSIKKLKSFLGPALFISVGYMDPGNWATDLEGGSRFGYQLMWVLLFSNIMALFLQTLVIKLALVTKNDLAQQCRKEYSKTVNIFLWLILELAIISTDLAEVIGTAIGLNILFG--LPLIAGVAITSLDTLLFLAIQRWGIRKLELLILLL 292 The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bpback to top |