FC932602

Overview
NameFC932602
Unique NameFC932602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAW (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain MW2) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAS (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain MSSA476) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAN (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain N315) GN=mntH PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAM (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAE (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Newman) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAC (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain COL) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAAB (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAA9 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH9) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAA8 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain NCTC 8325) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAA3 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain USA300) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_STAAW1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAS1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAN1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAM1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAE1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAC1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAAB1.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA91.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA81.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA31.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]

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Properties
Property NameValue
Genbank descriptionC34210D06EF PostHarveN Citrus clementina cDNA clone C34210D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bp
GCCGGCTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACTGC
CGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATGGA
CTCCTCCGAAACCCGAGAAGGAGAAAGCGGGTCCAAAGACAGCAATGAAA
CCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACGAC
GAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCAGA
TTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTCGT
GGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAGCG
TTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATAGC
AGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTTGC
TTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACTTG
GCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTGTG
GTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATATTCAGGAAGTAATTG
GGAGTGCCATTGCTATCCAGATTTTGAGTCACGGGGTCTTGCCACTATGG
GCCGGTGTCATCATTACGGCGTTGGATTGTTTCATATTTTTATTTTAGAG
ACTATGGAGTGAGGAACTGGAGCTGTTTTGCTGTATAATTGCACTATGGC
TTATCGTTGCTGGATGTTGCGACCACACCAGTGAAAAAAAAAAAAAA
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