FC932602

Overview
NameFC932602
Unique NameFC932602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAA2 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain JH1) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_STAA1 (Probable manganese transport protein mntH OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 54/131 (41.22%), Postives = 86/131 (65.65%), Query Frame = 3 
Query:  303 KKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFLF 695
            +K   F GPG L+++ ++DPGN    +Q GA  GY+LL++++ ++L  +L+Q ++ R+G+ATG  LA++ R         + W +AE+A+I  DI EVIGSAIA+ +L +  +PL  G +IT LD F+ LF
Sbjct:   31 QKFLSFLGPGLLVAVGYMDPGNWITSMQGGAQYGYTLLFVILISSLSAMLLQSMTVRLGIATGMDLAQMTRHYLSRPIAIIFWIIAELAIIATDIAEVIGSAIALNLLFN--IPLIVGALITVLDVFLLLF 159
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SHISS (Manganese transport protein mntH OS=Shigella sonnei (strain Ss046) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SHIF8 (Manganese transport protein mntH OS=Shigella flexneri serotype 5b (strain 8401) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SHIBS (Manganese transport protein mntH OS=Shigella boydii serotype 4 (strain Sb227) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SHIB3 (Manganese transport protein mntH OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALTY (Manganese transport protein mntH OS=Salmonella typhimurium GN=mntH PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALTI (Manganese transport protein mntH OS=Salmonella typhi GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALSV (Manganese transport protein mntH OS=Salmonella schwarzengrund (strain CVM19633) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALPK (Manganese transport protein mntH OS=Salmonella paratyphi A (strain AKU_12601) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_STAA21.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_STAA11.078e-2341.22Probable manganese transport protein mntH OS=Staph... [more]
MNTH_SHISS1.078e-2340.65Manganese transport protein mntH OS=Shigella sonne... [more]
MNTH_SHIF81.078e-2340.65Manganese transport protein mntH OS=Shigella flexn... [more]
MNTH_SHIBS1.078e-2340.65Manganese transport protein mntH OS=Shigella boydi... [more]
MNTH_SHIB31.078e-2340.65Manganese transport protein mntH OS=Shigella boydi... [more]
MNTH_SALTY1.078e-2340.65Manganese transport protein mntH OS=Salmonella typ... [more]
MNTH_SALTI1.078e-2340.65Manganese transport protein mntH OS=Salmonella typ... [more]
MNTH_SALSV1.078e-2340.65Manganese transport protein mntH OS=Salmonella sch... [more]
MNTH_SALPK1.078e-2340.65Manganese transport protein mntH OS=Salmonella par... [more]

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Properties
Property NameValue
Genbank descriptionC34210D06EF PostHarveN Citrus clementina cDNA clone C34210D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bp
GCCGGCTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACTGC
CGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATGGA
CTCCTCCGAAACCCGAGAAGGAGAAAGCGGGTCCAAAGACAGCAATGAAA
CCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACGAC
GAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCAGA
TTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTCGT
GGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAGCG
TTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATAGC
AGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTTGC
TTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACTTG
GCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTGTG
GTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATATTCAGGAAGTAATTG
GGAGTGCCATTGCTATCCAGATTTTGAGTCACGGGGTCTTGCCACTATGG
GCCGGTGTCATCATTACGGCGTTGGATTGTTTCATATTTTTATTTTAGAG
ACTATGGAGTGAGGAACTGGAGCTGTTTTGCTGTATAATTGCACTATGGC
TTATCGTTGCTGGATGTTGCGACCACACCAGTGAAAAAAAAAAAAAA
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