FC932602

Overview
NameFC932602
Unique NameFC932602
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length797
Libraries
Library NameType
PostHarveNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALPC (Manganese transport protein mntH OS=Salmonella paratyphi C (strain RKS4594) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALPA (Manganese transport protein mntH OS=Salmonella paratyphi A GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALG2 (Manganese transport protein mntH OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALEP (Manganese transport protein mntH OS=Salmonella enteritidis PT4 (strain P125109) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_SALCH (Manganese transport protein mntH OS=Salmonella choleraesuis GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_LACCB (Probable manganese transport protein mntH OS=Lactobacillus casei (strain BL23) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 66/184 (35.87%), Postives = 108/184 (58.70%), Query Frame = 3 
Query:  222 REKIL-IVDADSASTLNVDGDQVPPFS---WKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFI-FLF*RLWSEELELFCCIIALWLIV 758
            RE I+   D  S S   V+G    P +   WK L  +TGPG L+++ ++DPGN    +  GA   YSLL +++ ++L+ +L+Q ++AR+G+ TGR LA++ R+         LW + E+A++  DI E+IGSAIA+++L +  +PL  G+IIT  D  I  L  RL   ++E     + L +++
Sbjct:   10 REHIIHFEDTPSKSLDEVNGSVEVPHNAGFWKTLAAYTGPGILVAVGYMDPGNWITSIAGGASFKYSLLSVILISSLIAMLLQAMAARLGIVTGRDLAQMTRDHTSKAMGGFLWVITELAIMATDIAEIIGSAIALKLLFN--MPLIVGIIITTADVLILLLLMRLGFRKIEAVVATLVLVILL 191
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ESCF3 (Manganese transport protein mntH OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECOUT (Manganese transport protein mntH OS=Escherichia coli (strain UTI89 / UPEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECOSM (Manganese transport protein mntH OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
[Close]
BLAST of FC932602 vs. ExPASy Swiss-Prot
Match: MNTH_ECOSE (Manganese transport protein mntH OS=Escherichia coli (strain SE11) GN=mntH PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.078e-23
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 3 
Query:  324 GPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARVGVATGRHLAELCREEYPNWARFVLWFMAEVALIGADIQEVIGSAIAIQILSHGVLPLWAGVIITALDCFIFL 692
            GP F+ +I ++DPGN   ++Q+GA  GY LLW+++WA LM +LIQ+LSA++G+ATG++LAE  R+ YP    +  W  AE+  +  D+ E IG+AI  +++    + L  G ++T +  F+ L
Sbjct:   23 GPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILG--VSLLQGAVLTGIATFLIL 143
The following BLAST results are available for this feature:
BLAST of FC932602 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MNTH_SALPC1.078e-2340.65Manganese transport protein mntH OS=Salmonella par... [more]
MNTH_SALPA1.078e-2340.65Manganese transport protein mntH OS=Salmonella par... [more]
MNTH_SALG21.078e-2340.65Manganese transport protein mntH OS=Salmonella gal... [more]
MNTH_SALEP1.078e-2340.65Manganese transport protein mntH OS=Salmonella ent... [more]
MNTH_SALCH1.078e-2340.65Manganese transport protein mntH OS=Salmonella cho... [more]
MNTH_LACCB1.078e-2335.87Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_ESCF31.078e-2340.65Manganese transport protein mntH OS=Escherichia fe... [more]
MNTH_ECOUT1.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOSM1.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]
MNTH_ECOSE1.078e-2340.65Manganese transport protein mntH OS=Escherichia co... [more]

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Properties
Property NameValue
Genbank descriptionC34210D06EF PostHarveN Citrus clementina cDNA clone C34210D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC932602 ID=FC932602; Name=FC932602; organism=Citrus clementina; type=EST; length=797bp
GCCGGCTCACCAGTCCTCAGAGGTGAGATCTGTGGAACAGAATCTACTGC
CGAGTTTGGAATATTCCGTGCGTAGATAAAACAAAGAAAGTGAAAATGGA
CTCCTCCGAAACCCGAGAAGGAGAAAGCGGGTCCAAAGACAGCAATGAAA
CCAACCGCCTCCTTCCAATACCGTCACCACCGTCCTCAACGGAGGACGAC
GAGGAAGTCGCGTTCGATTCACGAGAGAAAATCTTGATCGTCGACGCAGA
TTCAGCCTCCACGTTGAACGTTGACGGTGACCAAGTGCCGCCTTTTTCGT
GGAAAAAGCTTTGGTTATTCACTGGACCCGGTTTCTTAATGAGCATAGCG
TTTCTGGATCCGGGGAATCTGGAGGGGGATCTCCAATCGGGGGCGATAGC
AGGGTACTCGCTTCTTTGGTTGCTAATGTGGGCCACCCTCATGGGCTTGC
TTATTCAGCTGCTGTCGGCACGAGTAGGGGTGGCCACGGGGCGTCACTTG
GCAGAGCTGTGTAGAGAGGAGTACCCCAATTGGGCGCGATTCGTGTTGTG
GTTCATGGCTGAAGTGGCCTTGATTGGTGCCGATATTCAGGAAGTAATTG
GGAGTGCCATTGCTATCCAGATTTTGAGTCACGGGGTCTTGCCACTATGG
GCCGGTGTCATCATTACGGCGTTGGATTGTTTCATATTTTTATTTTAGAG
ACTATGGAGTGAGGAACTGGAGCTGTTTTGCTGTATAATTGCACTATGGC
TTATCGTTGCTGGATGTTGCGACCACACCAGTGAAAAAAAAAAAAAA
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