GH733308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.923e-30 Identity = 68/86 (79.07%), Postives = 71/86 (82.56%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 L+DALVGLPG+ GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+LL Sbjct: 1038 LKDALVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1123
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.512e-30 Identity = 69/86 (80.23%), Postives = 70/86 (81.40%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LR ALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+ L Sbjct: 985 LRGALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1070
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.284e-30 Identity = 68/86 (79.07%), Postives = 72/86 (83.72%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LRDALVGLPGV+GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD V+TGRTVVCTIHQPSIDIFE+FDE+LL Sbjct: 991 LRDALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLL 1076
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR2_NICPL (Pleiotropic drug resistance protein 2 OS=Nicotiana plumbaginifolia GN=PDR2 PE=2 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.284e-30 Identity = 69/88 (78.41%), Postives = 72/88 (81.82%), Query Frame = -3 Query: 16 KPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 279 K LR+ALVGLPGV+GLSTEQRKRLT AVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+LL Sbjct: 996 KLLRNALVGLPGVDGLSTEQRKRLTTAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRKTVDTGRTVVCTIHQPSIDIFEAFDELLL 1083
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 4.284e-30 Identity = 67/86 (77.91%), Postives = 71/86 (82.56%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LRD++VGLPGV GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE++L Sbjct: 1006 LRDSIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELML 1091
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 4.284e-30 Identity = 67/86 (77.91%), Postives = 71/86 (82.56%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 L+DA+VGLPG+ GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+LL Sbjct: 953 LKDAVVGLPGITGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1038
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB40G_ARATH (ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.595e-30 Identity = 68/87 (78.16%), Postives = 70/87 (80.46%), Query Frame = -3 Query: 16 PLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 276 PLR ALVGLPG +GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+ L Sbjct: 963 PLRQALVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1049
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB31G_ARATH (ABC transporter G family member 31 OS=Arabidopsis thaliana GN=ABCG31 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.126e-29 Identity = 68/86 (79.07%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LR ALVGLPG GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+LL Sbjct: 965 LRYALVGLPGTTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1050
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.777e-29 Identity = 67/86 (77.91%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LR +LVGLPGV GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+ L Sbjct: 982 LRGSLVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1067
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR4_ORYSJ (Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica GN=PDR4 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 3.627e-29 Identity = 67/86 (77.91%), Postives = 70/86 (81.40%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 LR ALVGLPGV+GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD V+TGRTVVCTIHQPSIDIFEAFDE+ L Sbjct: 991 LRGALVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFEAFDELFL 1076 The following BLAST results are available for this feature:
BLAST of GH733308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >GH733308 ID=GH733308; Name=GH733308; organism=Citrus clementina; type=EST; length=293bpback to top |