GH733308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 1.800e-28 Identity = 64/85 (75.29%), Postives = 69/85 (81.18%), Query Frame = -3 Query: 19 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 273 L ALVGLPGVNGLSTEQRKRLTIAVELVANPSI+FMDEPTSGLD V+TGRT+VCTIHQPSIDIFE+FDE+L Sbjct: 963 LSGALVGLPGVNGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARSAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 1047
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR3_TOBAC (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum GN=PDR3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 4.010e-28 Identity = 61/86 (70.93%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++ LVG+PGV+GLSTEQRKRLTIAVELVANPSIIFMDEPT+GLD DTGRT+VCTIHQPSIDIFEAFDE++L Sbjct: 986 IKGMLVGMPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARSAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELIL 1071
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB37G_ARATH (ABC transporter G family member 37 OS=Arabidopsis thaliana GN=ABCG37 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.237e-28 Identity = 61/86 (70.93%), Postives = 70/86 (81.40%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++D+LVG+ GV+GLSTEQRKRLTIAVELVANPSIIFMDEPT+GLD DTGRT+VCTIHQPSIDIFEAFDE++L Sbjct: 989 IKDSLVGVTGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVADTGRTIVCTIHQPSIDIFEAFDELVL 1074
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.840e-28 Identity = 63/85 (74.12%), Postives = 69/85 (81.18%), Query Frame = -3 Query: 19 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 273 L ALVGLPGV+GLSTEQRKRLTIAVELVANPSI+FMDEPTSGLD V+TGRT+VCTIHQPSIDIFE+FDE+L Sbjct: 957 LSGALVGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELL 1041
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB42G_ARATH (ABC transporter G family member 42 OS=Arabidopsis thaliana GN=ABCG42 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.933e-28 Identity = 58/86 (67.44%), Postives = 71/86 (82.56%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++D++VG+PG++GL+TEQRKRLTIAVELV+NPSIIFMDEPT+GLD +TGRTVVCTIHQPSIDIFEAFDE++L Sbjct: 931 IKDSIVGIPGISGLTTEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQPSIDIFEAFDELIL 1016
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR13_ORYSJ (Pleiotropic drug resistance protein 13 OS=Oryza sativa subsp. japonica GN=PDR13 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.167e-27 Identity = 65/86 (75.58%), Postives = 68/86 (79.07%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 +R ALVG G+ GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD VDTGRTVVCTIHQPSIDIFEAFDE+LL Sbjct: 977 IRYALVGKQGLTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLL 1062
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB41G_ARATH (ABC transporter G family member 41 OS=Arabidopsis thaliana GN=ABCG41 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.524e-27 Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++D++VGLPG++GLSTEQRKRLTIAVELV+NPSIIF+DEPT+GLD +TGRTVVCTIHQPSIDIFE FDE++L Sbjct: 936 IKDSMVGLPGISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFETFDELIL 1021
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB38G_ARATH (ABC transporter G family member 38 OS=Arabidopsis thaliana GN=ABCG38 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.990e-27 Identity = 62/88 (70.45%), Postives = 69/88 (78.41%), Query Frame = -3 Query: 16 KPLRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 279 K LR+ LVG G++GLSTEQRKR+TIAVELVANPSI+FMDEPTSGLD VDTGRTVVCTIHQPSIDIFE+FDE+ L Sbjct: 958 KALREMLVGYVGISGLSTEQRKRMTIAVELVANPSILFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELFL 1045
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB30G_ARATH (ABC transporter G family member 30 OS=Arabidopsis thaliana GN=ABCG30 PE=2 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 1.990e-27 Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++D++VGLPG++GLS EQRKRLTIAVELVANPSIIFMDEPT+GLD +TGRTVVCTIHQPSIDIFE FDE++L Sbjct: 939 IKDSVVGLPGISGLSIEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNVAETGRTVVCTIHQPSIDIFETFDELIL 1024
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: AB43G_ARATH (ABC transporter G family member 43 OS=Arabidopsis thaliana GN=ABCG43 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 5.790e-27 Identity = 57/86 (66.28%), Postives = 70/86 (81.40%), Query Frame = -3 Query: 16 LRDALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 273 ++D+LVG+PG++G++ EQRKRLTIAVELV+NPSIIFMDEPT+GLD +TGRTVVCTIHQPSIDIFEAFDE++L Sbjct: 929 IKDSLVGVPGISGVTAEQRKRLTIAVELVSNPSIIFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQPSIDIFEAFDELIL 1014 The following BLAST results are available for this feature:
BLAST of GH733308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >GH733308 ID=GH733308; Name=GH733308; organism=Citrus clementina; type=EST; length=293bpback to top |