GH733308
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: SNQ2_YEAST (Protein SNQ2 OS=Saccharomyces cerevisiae GN=SNQ2 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.932e-14 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 +ALVG G GL+ EQRK+L+I VELVA P ++ F+DEPTSGLD G++++CTIHQPS +FE FD +LL Sbjct: 983 EALVGEVGC-GLNVEQRKKLSIGVELVAKPDLLLFLDEPTSGLDSQSSWAIIQLLRKLSKAGQSILCTIHQPSATLFEEFDRLLL 1066
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: CDR4_CANAL (ABC transporter CDR4 OS=Candida albicans GN=CDR4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.523e-14 Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = -3 Query: 19 DALVGLPGVNGLSTEQRKRLTIAVELVANPSI-IFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 267 DA+VG+ G GL+ EQRKRL+I VELVA P + +F+DEPTSGLD D G+ ++CTIHQPS + FD +L Sbjct: 978 DAVVGVSG-EGLNVEQRKRLSIGVELVAKPKLLVFLDEPTSGLDSQTAWSICKLIRKLADNGQAILCTIHQPSAILLAEFDRLL 1060
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCGI_DICDI (ABC transporter G family member 18 OS=Dictyostelium discoideum GN=abcG18 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.296e-14 Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = -3 Query: 16 NGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 240 +GLS QRKR+ + +EL ++P ++F+DEPTSGLD +GR+V+CTIHQPS IF+ FD +LL Sbjct: 951 SGLSLSQRKRVNMGIELASDPQLLFLDEPTSGLDSSAALKVMNLIKKIASSGRSVICTIHQPSTTIFKKFDHLLL 1025
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG1_DICDI (ABC transporter G family member 1 OS=Dictyostelium discoideum GN=abcG1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.296e-14 Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = -3 Query: 16 DALVGLPG--VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 D LVG + G+S +R+R+TI++EL+ PS+I +DEPTSGLD +GRT++CTIHQP +I++ FD +LL Sbjct: 251 DTLVGTADNKIRGISGGERRRVTISIELLTGPSVILLDEPTSGLDASTSFYVMSALKKLAKSGRTIICTIHQPRSNIYDMFDNLLL 336
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR5_YEAST (Pleiotropic ABC efflux transporter of multiple drugs OS=Saccharomyces cerevisiae GN=PDR5 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.342e-14 Identity = 40/84 (47.62%), Postives = 53/84 (63.10%), Query Frame = -3 Query: 19 DALVGLPGVNGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 267 DA+VG+ G GL+ EQRKRLTI VEL A P ++F+DEPTSGLD + G+ ++CTIHQPS + + FD +L Sbjct: 1000 DAVVGVAG-EGLNVEQRKRLTIGVELTAKPKLLVFLDEPTSGLDSQTAWSICQLMKKLANHGQAILCTIHQPSAILMQEFDRLL 1082
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG4_HUMAN (ATP-binding cassette sub-family G member 4 OS=Homo sapiens GN=ABCG4 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.342e-14 Identity = 37/73 (50.68%), Postives = 46/73 (63.01%), Query Frame = -3 Query: 16 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 234 LS QRKRL IA+ELV NP ++F DEPTSGLD GRT++CTIHQPS +FE FD++ + Sbjct: 201 LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAQGGRTIICTIHQPSAKLFEMFDKLYI 273
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: ABCG1_MOUSE (ATP-binding cassette sub-family G member 1 OS=Mus musculus GN=Abcg1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.342e-14 Identity = 43/90 (47.78%), Postives = 52/90 (57.78%), Query Frame = -3 Query: 22 KPLRDALVGLPGVN----GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEV 279 K + AL LP N LS QRKRL IA+ELV NP ++F DEPTSGLD GR++VCTIHQPS +FE FD++ Sbjct: 198 KEILTALGLLPCANTRTGSLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKGLAQGGRSIVCTIHQPSAKLFELFDQL 287
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: WHITE_CERCA (Protein white OS=Ceratitis capitata GN=W PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.589e-14 Identity = 38/86 (44.19%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 16 RDALVGLPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 270 ++ L+G+PG V GLS +RKRL A E + +P ++ DEPTSGLD G+TV+ TIHQPS ++FE FD++LL Sbjct: 219 QNTLIGVPGRVKGLSGGERKRLAFASEALTDPPLLICDEPTSGLDSFMAHSVVQVLKKLSQKGKTVILTIHQPSSELFELFDKILL 304
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: PDR15_YEAST (ATP-dependent permease PDR15 OS=Saccharomyces cerevisiae GN=PDR15 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.252e-13 Identity = 40/84 (47.62%), Postives = 52/84 (61.90%), Query Frame = -3 Query: 19 DALVGLPGVNGLSTEQRKRLTIAVELVANPS-IIFMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVL 267 DA+VG+ G GL+ EQRKRLTI VEL A P ++F+DEPTSGLD G+ ++CTIHQPS + + FD +L Sbjct: 1015 DAVVGVAG-EGLNVEQRKRLTIGVELAARPKLLVFLDEPTSGLDSQTAWDTCQLMRKLATHGQAILCTIHQPSAILMQQFDRLL 1097
BLAST of GH733308 vs. ExPASy Swiss-Prot
Match: YN99_YEAST (Uncharacterized ABC transporter ATP-binding protein/permease YNR070W OS=Saccharomyces cerevisiae GN=YNR070W PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.636e-13 Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = -3 Query: 16 DALVGLPGVNGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDXXXXXXXXXXXXXXVDTGRTVVCTIHQPSIDIFEAFDEVLL 267 +ALVG G GL+ EQRK+L+I VELV P ++ F+DEPTSGLD G++++CTIHQPS +FE FD +LL Sbjct: 859 EALVGEIGY-GLNVEQRKKLSIGVELVGKPDLLLFLDEPTSGLDSQSAWAVVKMLKRLALAGQSILCTIHQPSATLFEQFDRLLL 942 The following BLAST results are available for this feature:
BLAST of GH733308 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 92
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Sequences
The
following sequences are available for this feature:
EST sequence >GH733308 ID=GH733308; Name=GH733308; organism=Citrus clementina; type=EST; length=293bpback to top |