GH733318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GH733318 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 3.273e-14 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = -1 Query: 39 GEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 362 G+ +G D L +PD +A DP +SFK+A+WFWM + H+V+ G+G T ING +EC AV R+ ++ +C +FG+ PG NL C Sbjct: 199 GKNIGFDGLRDPDKVAQDPTISFKTALWFWMN------NVHQVMSQ---------------GFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of GH733318 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 4.275e-14 Identity = 35/109 (32.11%), Postives = 62/109 (56.88%), Query Frame = -1 Query: 39 CGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 365 CG++L ++LL P+L++++P ++F++ +WFWM + P ++++ G+G T IN G+EC G + AV RI ++ +CG+ G+ PG NL C Sbjct: 182 CGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP-------VLNQ--------------GFGATIRAIN-GMECNGGNSGAVNARIRYYRDYCGQLGVDPGPNLSC 268
BLAST of GH733318 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 4.001e-12 Identity = 39/109 (35.78%), Postives = 56/109 (51.38%), Query Frame = -1 Query: 39 GEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRN-RIGFFTTFCGKFGIQPGDNLDC 362 G A+G D L +P +A D V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 183 GRAIGFDGLGDPGRVARDAVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of GH733318 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.986e-11 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = -1 Query: 135 MTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIEC 272 MT Q KPSCH+VI + W+P+A + AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46
BLAST of GH733318 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.778e-11 Identity = 34/108 (31.48%), Postives = 53/108 (49.07%), Query Frame = -1 Query: 39 GEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAIEVNAGRLPGYGLTTNIINGGIECGQGGNDAVRNRIGFFTTFCGKFGIQPGDNLDC 362 G A D L P+ ++ D V+SFK+A+W+WM P +I++ G+G T ING +EC V+ R+ ++T +C + G+ GDNL C Sbjct: 184 GSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270 The following BLAST results are available for this feature:
BLAST of GH733318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >GH733318 ID=GH733318; Name=GH733318; organism=Citrus clementina; type=EST; length=383bpback to top |