BQ623302
|
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_ORYSJ (Superoxide dismutase [Cu-Zn], chloroplastic OS=Oryza sativa subsp. japonica GN=SODCP PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 5.072e-39 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNIVANA GVAEATIVD QI L GPN+VVGRAFVVHELEDDLGKGGHELSL+TGNAGGRLACGVVGLTP+
Sbjct: 139 GDLGNIVANAEGVAEATIVDKQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPL 211 HSP 2 Score: 46.595 bits (109), Expect = 5.072e-39 Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG HFNPNN+TH
Sbjct: 109 DTTNGCISTGPHFNPNNLTH 128
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_ARATH (Superoxide dismutase [Cu-Zn], chloroplastic OS=Arabidopsis thaliana GN=SODCP PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.121e-38 Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNI ANA+GVAE TIVDNQI L GPN+VVGRAFVVHEL+DDLGKGGHELSLTTGNAGGRLACGV+GLTP+
Sbjct: 144 GDLGNINANADGVAETTIVDNQIPLTGPNSVVGRAFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLTPL 216 HSP 2 Score: 47.7506 bits (112), Expect = 1.121e-38 Identity = 19/20 (95.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG HFNPNNMTH
Sbjct: 114 DTTNGCISTGPHFNPNNMTH 133
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_SOLLC (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum GN=SODCP.2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.461e-38 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNIVANA+GVAE T+VDNQI L GPN+VVGRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 145 GDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 217 HSP 2 Score: 45.0542 bits (105), Expect = 1.461e-38 Identity = 17/20 (85.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGC+STGAHFNPN +TH
Sbjct: 115 DTTNGCMSTGAHFNPNKLTH 134
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_VITVI (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera GN=SODCP PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.461e-38 Identity = 64/73 (87.67%), Postives = 67/73 (91.78%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNI+ANA GVAEATIVD QI L GPN V+GRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 140 GDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 212 HSP 2 Score: 46.2098 bits (108), Expect = 1.461e-38 Identity = 18/20 (90.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGC+STGAHFNPN MTH
Sbjct: 110 DTTNGCMSTGAHFNPNGMTH 129
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_MEDSA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Medicago sativa GN=SODCP PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.906e-38 Identity = 65/73 (89.04%), Postives = 70/73 (95.89%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNI+A+ANGVAEATIVDNQI L GPN+V+GRA VVHELEDDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 130 GDLGNIIADANGVAEATIVDNQIPLTGPNSVIGRALVVHELEDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 202 HSP 2 Score: 44.2838 bits (103), Expect = 1.906e-38 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG HFNPN +TH
Sbjct: 100 DTTNGCISTGPHFNPNQLTH 119
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_PEA (Superoxide dismutase [Cu-Zn], chloroplastic OS=Pisum sativum GN=SODCP PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.235e-38 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNIVANA GVAEATIVDNQI L GPN+VVGRA VVHEL+DDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 130 GDLGNIVANAEGVAEATIVDNQIPLTGPNSVVGRALVVHELQDDLGKGGHELSLSTGNAGGRLACGVVGLTPV 202 HSP 2 Score: 44.2838 bits (103), Expect = 3.235e-38 Identity = 17/20 (85.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG HFNPN +TH
Sbjct: 100 DTTNGCISTGPHFNPNKLTH 119
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_SOLCS (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra GN=SODCP PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.481e-38 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNI+ANA+GVAEATIVDNQI L GPN VVGRAFVVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 148 GDLGNIIANADGVAEATIVDNQIPLTGPNAVVGRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 220 HSP 2 Score: 42.743 bits (99), Expect = 5.481e-38 Identity = 17/20 (85.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG HFNPN TH
Sbjct: 118 DTTNGCISTGPHFNPNGNTH 137
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_PETHY (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida GN=SODCP PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 7.143e-38 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNI ANA+GVAEAT+VDNQI L GPN+VVGRA VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 147 GDLGNIEANASGVAEATLVDNQIPLSGPNSVVGRALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 219 HSP 2 Score: 43.1282 bits (100), Expect = 7.143e-38 Identity = 16/20 (80.00%), Postives = 18/20 (90.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGC+STG HFNPN +TH
Sbjct: 117 DTTNGCMSTGPHFNPNGLTH 136
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_ZANAE (Superoxide dismutase [Cu-Zn], chloroplastic OS=Zantedeschia aethiopica GN=SODCP PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 7.144e-38 Identity = 65/73 (89.04%), Postives = 69/73 (94.52%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNIVAN +G+AEATIVD+QI L G N+VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 144 GDLGNIVANVDGLAEATIVDDQIPLSGSNSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 216 HSP 2 Score: 45.0542 bits (105), Expect = 7.144e-38 Identity = 17/20 (85.00%), Postives = 19/20 (95.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGCISTG+HFNPN +TH
Sbjct: 114 DTTNGCISTGSHFNPNKLTH 133
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Match: SODCP_SPIOL (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea GN=SODCP PE=1 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 1.310e-36 Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 2 Query: 95 GDLGNIVANANGVAEATIVDNQISLDGPNTVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 313
GDLGNIVAN +GVAEATIVDNQI L GPN+VVGRA VVHELEDDLGKGGHELS TTGNAGGRLACGVVGLTPV
Sbjct: 150 GDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLTPV 222 HSP 2 Score: 40.0466 bits (92), Expect = 1.310e-36 Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 1 Query: 1 DTTNGCISTGAHFNPNNMTH 60
DTTNGC+STG HFNP+ TH
Sbjct: 120 DTTNGCMSTGPHFNPDKKTH 139 The following BLAST results are available for this feature:
BLAST of BQ623302 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135 ZOOMx 1POSITION0
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >BQ623302 ID=BQ623302; Name=BQ623302; organism=Citrus sinensis; type=EST; length=459bpback to top |